RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 CLCA1A8K7I4 914 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 MYO1GB0I1T2 1018 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 PLIN3O60664 434 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 RSL1D1O76021 490 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 SLU7O95391 586 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 CPN1P15169 458 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 DPP4P27487 766 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 PCSK6P29122 969 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 EVI2BP34910 448 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 STARP49675 285 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 KEAP1Q14145 624 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 DEFB113Q30KQ7 82 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 FBXL19-AS1Q494R0 122 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 CHMP1BQ7LBR1 199 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 P4HA3Q7Z4N8 544 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 LUZP2Q86TE4 346 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 GRAMD2AQ8IUY3 354 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 NTNG2Q96CW9 530 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 TM9SF2Q99805 663 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 IQCGQ9H095 443 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 Q9N2J8 555 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 SIRT5Q9NXA8 310 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 MID2Q9UJV3 735 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 CBLCQ9ULV8 474 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 JMJD1CQ15652 2540 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 SEC22BO75396 215 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 MPDZO75970 2070 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 SLITRK5O94991 958 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 IL18BPO95998 194 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 FN1P02751 2386 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 RAF1P04049 648 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 INHBBP09529 407 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 UROSP10746 265 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 CPA3P15088 417 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 GPC1P35052 558 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 DNAJB13P59910 316 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 VSNL1P62760 191 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 DECR1Q16698 335 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 RAET1LQ5VY80 246 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 CLEC6AQ6EIG7 209 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 FAM71E1Q6IPT2 247 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 NOXRED1Q6NXP6 359 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 POMZP3Q6PJE2 187 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 PLXDC2Q6UX71 529 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 IKBIPQ70UQ0 350 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 SZRD1Q7Z422 152 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 UBQLNLQ8IYU4 475 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 GCNT2Q8N0V5 402 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 C4orf33Q8N1A6 199 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 FAM76AQ8TAV0 307 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 EPS8L3Q8TE67 593 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 NUDT8Q8WV74 236 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 GFM2Q969S9 779 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 INTS12Q96CB8 462 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 C11orf24Q96F05 449 aaPredicted RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 ZFP3Q96NJ6 502 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 SFXN3Q9BWM7 321 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 RBM24Q9BX46 236 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 C12orf65Q9H3J6 166 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 ACBD3Q9H3P7 528 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 GLIPR2Q9H4G4 154 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 ZNF395Q9H8N7 513 aaPredicted RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 PPCSQ9HAB8 311 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 MRTO4Q9UKD2 239 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 EDARQ9UNE0 448 aa14.28□□□□□ -0.12
CHCHD3-204ENST00000457942 MED12LQ86YW9 2145 aa14.27□□□□□ -0.12
CHCHD3-204ENST00000457942 A0A087WV62 115 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 PLOD2O00469 737 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 RGS14O43566 566 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 ATE1O95260 518 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 KRT4P19013 534 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 CRHR1P34998 444 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 CLK3P49761 638 aaKnown RBP14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 LHX2P50458 406 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 GFRA1P56159 465 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 PSG6Q00889 435 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 FOXF2Q12947 444 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 HSPB3Q12988 150 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 PRSS53Q2L4Q9 553 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 CYP27C1Q4G0S4 372 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 LIPMQ5VYY2 423 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 TRIM46Q7Z4K8 759 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 LINC01560Q8TB33 94 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 YIPF4Q9BSR8 244 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 DSN1Q9H410 356 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 LRTM1Q9HBL6 345 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 EQTNQ9NQ60 294 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 SDHAF3Q9NRP4 125 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 OXSMQ9NWU1 459 aa14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 C19orf53Q9UNZ5 99 aaPredicted RBP14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 WBP11Q9Y2W2 641 aaKnown RBP14.27□□□□□ -0.13
CHCHD3-204ENST00000457942 C17orf51A8MQB3 221 aa14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 UPK1AO00322 258 aa14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 SLC28A1O00337 649 aa14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 PDPK1O15530 556 aa14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 CHEK2O96017 543 aa14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 HK1P19367 917 aa14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 CPOXP36551 454 aa14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 PSMD4P55036 377 aaKnown RBP14.26□□□□□ -0.13
CHCHD3-204ENST00000457942 DSCR4P56555 118 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms