RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ZCCHC12Q6PEW1 402 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ZNF730Q6ZMV8 503 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 MTSS1LQ765P7 747 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 OLIG3Q7RTU3 272 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 C16orf62Q7Z3J2 963 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ASPGQ86U10 573 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 VRK2Q86Y07 508 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 LAX1Q8IWV1 398 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 RNF113BQ8IZP6 322 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 LRRC25Q8N386 305 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ARIH2OSQ8N7S6 290 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 PSD4Q8NDX1 1056 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 OR9A2Q8NGT5 310 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 OR52P1PQ8NH57 321 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 BRIX1Q8TDN6 353 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ADAMTS15Q8TE58 950 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 GANCQ8TET4 914 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ZFPM2Q8WW38 1151 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 RSC1A1Q92681 617 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 YIPF4Q9BSR8 244 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 KRCC1Q9NPI7 259 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ERVK13-1Q9NX77 482 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 WBP1LQ9NX94 342 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 MUTYHQ9UIF7 546 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 GPR55Q9Y2T6 319 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 URADA6NGE7 173 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 J3QRE1 110 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 K7EQS6 105 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 TNFRSF10CO14798 259 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 RGS13O14921 159 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 THY1P04216 161 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 TRHRP34981 398 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 SLC1A3P43003 542 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 HTR3AP46098 478 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 RFX2P48378 723 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ZNF136P52737 540 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 CDH11P55287 796 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 RGS8P57771 180 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 RPS25P62851 125 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 EEF1A1P68104 462 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 HTRA3P83110 453 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 SCN1BQ07699 218 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ZNF155Q12901 538 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 SUZ12Q15022 739 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 PUS10Q3MIT2 529 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 TJAP1Q5JTD0 557 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 DDI2Q5TDH0 399 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 GDF7Q7Z4P5 450 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 OR7G2Q8NG99 324 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 OR4Q3Q8NH05 313 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 HOXB13Q92826 284 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 SLC35B4Q969S0 331 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 OTUB1Q96FW1 271 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 SLC41A3Q96GZ6 507 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 RIPOR3Q96MK2 946 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 MCHR1Q99705 422 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 KATNB1Q9BVA0 655 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 PIGUQ9H490 435 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 FGF22Q9HCT0 170 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 LYRM4Q9HD34 91 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ZDHHC4Q9NPG8 344 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ZNF223Q9UK11 482 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 ZNF232Q9UNY5 417 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 C19orf53Q9UNZ5 99 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 GPSM3Q9Y4H4 160 aa11.7□□□□□ -0.54
ECHDC1-209ENST00000454591 LRP4O75096 1905 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 A0A1W2PS29 197 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 A6NCN8 305 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 POLR1CO15160 346 aaPredicted RBP11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 LATO43561 262 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 AKAP8O43823 692 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 SOX30O94993 753 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 LYPD3O95274 346 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 APBB3O95704 486 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 AK1P00568 194 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 SLC35G6P0C7Q6 338 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 C8orf89P0DMQ9 161 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 CD53P19397 219 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 NTSR1P30989 418 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 MAP3K8P41279 467 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 PDX1P52945 283 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 OR2B6P58173 313 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 RAB8AP61006 207 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 PPP3R1P63098 170 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 BTN3A2P78410 334 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 HNRNPA0Q13151 305 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 MANEAQ5SRI9 462 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 TYW3Q6IPR3 259 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 FBXO42Q6P3S6 717 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 PLEKHM3Q6ZWE6 761 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 RRM2BQ7LG56 351 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 GID4Q8IVV7 300 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 FAM20CQ8IXL6 584 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 RDH10Q8IZV5 341 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 SLC43A2Q8N370 569 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 CELF2-AS1Q8N7Q2 184 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 OR4K14Q8NGD5 310 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 OR6F1Q8NGZ6 308 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 LCN9Q8WX39 176 aa11.69□□□□□ -0.54
ECHDC1-209ENST00000454591 SLC9A6Q92581 669 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms