RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 SEM1Q6ZVN7 128 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 SZRD1Q7Z422 152 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 LIX1LQ8IVB5 337 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 NUDCD3Q8IVD9 361 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 DMRTC2Q8IXT2 367 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-203ENST00000454233 CEP70Q8NHQ1 597 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 CIDECQ96AQ7 238 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-203ENST00000454233 ZNF559Q9BR84 538 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 LMF2Q9BU23 707 aaKnown RBP9.72□□□□□ -0.85
DDX39A-203ENST00000454233 CALHM2Q9HA72 323 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 MCCC2Q9HCC0 563 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 EQTNQ9NQ60 294 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 ACSS1Q9NUB1 689 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-203ENST00000454233 PPP4R1LQ9P1A2 415 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 BAIAP2L1Q9UHR4 511 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 FBXL2Q9UKC9 423 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 ABCG2Q9UNQ0 655 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 ARHGAP21Q5T5U3 1957 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 HCFC1P51610 2035 aa9.72□□□□□ -0.85
DDX39A-203ENST00000454233 H0Y3Z8 333 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 TYROBPO43914 113 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 PEX11AO75192 247 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 SKAP2O75563 359 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-203ENST00000454233 IL33O95760 270 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 TUBBP07437 444 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 CPN1P15169 458 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 CREB1P16220 341 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 BMP5P22003 454 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 DPP4P27487 766 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 CEACAM8P31997 349 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-203ENST00000454233 GABRA3P34903 492 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 PEX19P40855 299 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 PRKAG1P54619 331 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 SRYQ05066 204 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 MYBPHQ13203 477 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 PDE7AQ13946 482 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 ZNF385BQ569K4 471 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 CES4AQ5XG92 561 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 OR5M10Q6IEU7 315 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 TRIM42Q8IWZ5 723 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 CDRT4Q8N9R6 151 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 NUP43Q8NFH3 380 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 TNIP2Q8NFZ5 429 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 ZPLD1Q8TCW7 415 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 GPR151Q8TDV0 419 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 RNF138Q8WVD3 245 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 SFXN2Q96NB2 322 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 PTGES2Q9H7Z7 377 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 FAM120CQ9NX05 1096 aaKnown RBP9.71□□□□□ -0.86
DDX39A-203ENST00000454233 ZNF629Q9UEG4 869 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-203ENST00000454233 KCNN3Q9UGI6 736 aa9.71□□□□□ -0.86
DDX39A-203ENST00000454233 MRPS18CQ9Y3D5 142 aaKnown RBP9.71□□□□□ -0.86
DDX39A-203ENST00000454233 MBD3L4A6NDZ8 208 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 MBD3L3A6NE82 208 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 MBD3L5A6NJ08 208 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 KDM4EB2RXH2 506 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 SCAMP2O15127 329 aaKnown RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 EMC8O43402 210 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 FADS1O60427 444 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 LYPLA1O75608 230 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 HSPA4LO95757 839 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 CHMP24386 653 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 UQCRC1P31930 480 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 FRKP42685 505 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 ETV4P43268 484 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 SERPINB4P48594 390 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 ASCL1P50553 236 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 DGKQP52824 942 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 GAS1P54826 345 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 GFRA1P56159 465 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 DSCR4P56555 118 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 WNT3P56703 355 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 PRR5P85299 388 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 ZNF844Q08AG5 666 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 STX5Q13190 355 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 XKR7Q5GH72 579 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 ARSKQ6UWY0 536 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 CHMP1BQ7LBR1 199 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 CROCCP2Q86T23 111 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 FNDC5Q8NAU1 212 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 NAXEQ8NCW5 288 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 MBD3L2Q8NHZ7 208 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 SLC9A6Q92581 669 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 TUBGCP3Q96CW5 907 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 RMND5BQ96G75 393 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 MS4A4EQ96PG1 132 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 PRPF18Q99633 342 aaKnown RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 TUBA1CQ9BQE3 449 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 TBL1XR1Q9BZK7 514 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 CENPHQ9H3R5 247 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 DSN1Q9H410 356 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 HHATLQ9HCP6 504 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 SSU72Q9NP77 194 aaKnown RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 ATAD3AQ9NVI7 634 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 GIMAP2Q9UG22 337 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 ATP6V1HQ9UI12 483 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 ZDHHC2Q9UIJ5 367 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 FOXD3Q9UJU5 478 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-203ENST00000454233 RAB21Q9UL25 225 aa9.7□□□□□ -0.86
DDX39A-203ENST00000454233 RPH3AQ9Y2J0 694 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms