RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 EDNRAP25101 427 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ARNTP27540 789 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DDTP30046 118 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SSTR2P30874 369 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FRKP42685 505 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 LHX1P48742 406 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PRKAG1P54619 331 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 NRG3P56975 720 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 HNRNPKP61978 463 aaKnown RBP eCLIP2.09□□□□□ -2.07
USP53-202ENST00000450251 DUSP4Q13115 394 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SCGB2A2Q13296 93 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MADCAM1Q13477 382 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 LTB4RQ15722 352 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FAM174BQ3ZCQ3 159 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ARSIQ5FYB1 569 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PPM1JQ5JR12 505 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CES5AQ6NT32 575 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MTFR2Q6P444 385 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TRMT10BQ6PF06 316 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 LYPD4Q6UWN0 246 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TFAP2EQ6VUC0 442 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 LAX1Q8IWV1 398 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ARHGAP12Q8IWW6 846 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 NPAS3Q8IXF0 933 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FAM185AQ8N0U4 392 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GABRG1Q8N1C3 465 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FAM98AQ8NCA5 519 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 OR51L1Q8NGJ5 315 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR5L2Q8NGL0 311 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR8S1Q8NH09 359 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 C2CD4CQ8TF44 421 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GLYATL2Q8WU03 294 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 AUTS2Q8WXX7 1259 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GTPBP3Q969Y2 492 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 TMEM159Q96B96 161 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MTFMTQ96DP5 389 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 PABPC5Q96DU9 382 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 RNF31Q96EP0 1072 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 P2RY11Q96G91 374 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FYTTD1Q96QD9 318 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 IL4I1Q96RQ9 567 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MBOAT4Q96T53 435 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 IL12RB2Q99665 862 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CLSTN3Q9BQT9 956 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF2Q9BSG1 426 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF426Q9BUY5 554 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 HDHD5Q9BXW7 423 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CWH43Q9H720 699 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GALNT9Q9HCQ5 603 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PTPRHQ9HD43 1115 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 NEUROD4Q9HD90 331 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DDIT4Q9NX09 232 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MIOSQ9NXC5 875 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GPR83Q9NYM4 423 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 RASL12Q9NYN1 266 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TRPC4Q9UBN4 977 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 RIPK3Q9Y572 518 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CUL9Q8IWT3 2517 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 TMEM129A0AVI4 362 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 URADA6NGE7 173 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR5K4A6NMS3 321 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CXorf49A8MYA2 514 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 NPIPB9F8W1W9 429 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 G3V2L1 256 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 HPGDSO60760 199 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 AOC2O75106 756 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SLC25A12O75746 678 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR6A2O95222 327 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ABHD16AO95870 558 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MT-CO1P00395 513 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 C1RP00736 705 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TGFB1P01137 390 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 JCHAINP01591 159 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ADRB2P07550 413 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ERCC1P07992 297 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 HOXD4P09016 255 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 PGAM2P15259 253 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF25P17030 456 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 FPR3P25089 353 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 G0S2P27469 103 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SERPINA4P29622 427 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR10J1P30954 320 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ARR3P36575 388 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 RNF144AP50876 292 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 CRISP3P54108 245 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SNRPEP62304 92 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 CXADRP78310 365 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 IRF9Q00978 393 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SP4Q02446 784 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MGAT3Q09327 533 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FABP9Q0Z7S8 132 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MBTPS1Q14703 1052 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TMEM198Q66K66 360 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CLEC6AQ6EIG7 209 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DHRS7BQ6IAN0 325 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 PDE12Q6L8Q7 609 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 FIGNL1Q6PIW4 674 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SLC16A12Q6ZSM3 486 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 C6orf120Q7Z4R8 191 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms