RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RALGAPA2Q2PPJ7 1873 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 PLXNA1Q9UIW2 1896 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 TRBV4-1A0A0J9YWV2 114 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 A0A1B0GTQ1 180 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 OR2M5A3KFT3 312 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 IQCF5A8MTL0 148 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 RAD1O60671 282 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 OR2A4O95047 310 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 IGF2P01344 180 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 WNT1P04628 370 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 CPN1P15169 458 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 EPB42P16452 691 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 CELP19835 753 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 PPIBP23284 216 aaKnown RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 P2RY4P51582 365 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 ZNF140P52738 457 aaPredicted RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 ARFIP1P53367 373 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 MVDP53602 400 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 DCDP81605 110 aaKnown RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 DGCR2P98153 550 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 MLLT1Q03111 559 aaPredicted RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 RAB40BQ12829 278 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 ECH1Q13011 328 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 CLN3Q13286 438 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 TTLL4Q14679 1199 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 GUCA2BQ16661 112 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 TMEM255AQ5JRV8 349 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 FAM109BQ6ICB4 259 aaPredicted RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 ZNF613Q6PF04 617 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 ANGPTL8Q6UXH0 198 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 BHLHA9Q7RTU4 235 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 SYT12Q8IV01 421 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 CELF5Q8N6W0 485 aaKnown RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 FAM71CQ8NEG0 241 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 OR11G2Q8NGC1 345 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 OR4K2Q8NGD2 314 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 THAP6Q8TBB0 222 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 RXFP4Q8TDU9 374 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 GTF3AQ92664 365 aaKnown RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 EXOSC8Q96B26 276 aaKnown RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 PEX11GQ96HA9 241 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 ZNF582Q96NG8 517 aaPredicted RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 OR2A7Q96R45 310 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 ADAT1Q9BUB4 502 aaKnown RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 SEBOXQ9HB31 216 aaPredicted RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 BARX1Q9HBU1 254 aaPredicted RBP8.11□□□□□ -1.11
LSM5-208ENST00000450169 CRTAC1Q9NQ79 661 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 ZFP57Q9NU63 452 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 GHRLQ9UBU3 117 aa8.11□□□□□ -1.11
LSM5-208ENST00000450169 FXYD6-FXYD2A0A087WZ82 144 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 IRGMA1A4Y4 181 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 MEX3AA1L020 520 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 C1orf226A1L170 272 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 PIRO00625 290 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 UBE2CO00762 179 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 YY2O15391 372 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 LCMT2O60294 686 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 CDC123O75794 336 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 GKP32189 559 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 CD79BP40259 229 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 CRATP43155 626 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 MTNR1BP49286 362 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 FNTBP49356 437 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 TTPAP49638 278 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 OAZ1P54368 228 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 GAS1P54826 345 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 RAB5BP61020 215 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 EEF1A1P68104 462 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 EEF1A2Q05639 463 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 ZNF155Q12901 538 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 LY6KQ17RY6 165 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 CRB2Q5IJ48 1285 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 RAB41Q5JT25 222 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 EEF1A1P5Q5VTE0 462 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SLC30A6Q6NXT4 461 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 ZC3H14Q6PJT7 736 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 PLPPR4Q7Z2D5 763 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SERINC5Q86VE9 423 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 PIANPQ8IYJ0 282 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 HDDC3Q8N4P3 179 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 MEIOBQ8N635 442 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 IQCF1Q8N6M8 205 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 NLGN2Q8NFZ4 835 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 OR8J2Q8NGG1 315 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 CSGALNACT1Q8TDX6 532 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 ZNF707Q96C28 371 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 RNFT2Q96EX2 444 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 HMCESQ96FZ2 354 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 CMTM7Q96FZ5 175 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 APIPQ96GX9 242 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 TMEM41AQ96HV5 264 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 EAF1Q96JC9 268 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 MS4A4EQ96PG1 132 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 BBS4Q96RK4 519 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SMOQ99835 787 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SEMA3CQ99985 751 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 EBPLQ9BY08 206 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 POLDIP3Q9BY77 421 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 FXYD6Q9H0Q3 95 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms