RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GANCQ8TET4 914 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 NIPSNAP1Q9BPW8 284 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 CMSS1Q9BQ75 279 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SEMA4CQ9C0C4 833 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 BHLHE41Q9C0J9 482 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 THSD1Q9NS62 852 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SPHK1Q9NYA1 384 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 ARRDC5A6NEK1 342 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 LEFTY2O00292 366 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 ALPIP09923 528 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 POLR2LP62875 67 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SERTAD2Q14140 314 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 MPPE1Q53F39 396 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 MZT2AQ6P582 158 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 OR52J3Q8NH60 311 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 ELMOD3Q96FG2 381 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 PPP1R16AQ96I34 528 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 LYSMD1Q96S90 227 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 AHSPQ9NZD4 102 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 MIOXQ9UGB7 285 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 PPIL1Q9Y3C6 166 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 A0A1W2PRU2 124 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 AGAP14A8MT82 685 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 CASKO14936 926 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SCAMP2O15127 329 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SULT1A3P0DMM9 295 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SULT1A4P0DMN0 295 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 ANXA11P50995 505 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 CAPZA1P52907 286 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 DDX39BQ13838 428 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 PUM1Q14671 1186 aaKnown RBP eCLIP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 CHRNA6Q15825 494 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 TMEM88Q6PEY1 159 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 TMEM91Q6ZNR0 172 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 TM9SF4Q92544 642 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 ECHDC3Q96DC8 303 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 GAL3ST1Q99999 423 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 CRB3Q9BUF7 120 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 DPAGT1Q9H3H5 408 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 EQTNQ9NQ60 294 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 CCL26Q9Y258 94 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SDC3O75056 442 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ALDOBP05062 364 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 C8AP07357 584 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 NR2F6P10588 404 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 GJA1P17302 382 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 S100PP25815 95 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 MLLT11Q13015 90 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 SCARB2Q14108 478 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 NDUFA9Q16795 377 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 TCTE1Q5JU00 501 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 PDZD9Q8IXQ8 264 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 EIF4E3Q8N5X7 224 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 OTULINQ96BN8 352 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 DDOQ99489 341 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 SPRTNQ9H040 489 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ZNF624Q9P2J8 865 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 DYRK1BQ9Y463 629 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ASB4Q9Y574 426 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 CHURC1-FNTBB4DL54 471 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 RNASET2O00584 256 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 TO15178 435 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 LANCL1O43813 399 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 SIX6O95475 246 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ADAP00813 363 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 PVALBP20472 110 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 MC2RQ01718 297 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 RGNQ15493 299 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 SFRP5Q5T4F7 317 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 HAGHLQ6PII5 290 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 GOT1L1Q8NHS2 421 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ZDHHC1Q8WTX9 485 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 PAPOLGQ9BWT3 736 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 OR51M1Q9H341 326 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 MYOFQ9NZM1 2061 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 CRTC2Q53ET0 693 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 TPGS1Q6ZTW0 290 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 USP30Q70CQ3 517 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ZNF551Q7Z340 670 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 C12orf40Q86WS4 652 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 KRT78Q8N1N4 520 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 OR52N2Q8NGI0 321 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 IL4I1Q96RQ9 567 aa12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 ING1Q9UK53 422 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 YARS2Q9Y2Z4 477 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-204ENST00000449372 EFCAB7A8K855 629 aa12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 WRBO00258 174 aa12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 TCRBP04435 133 aa12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 GKP32189 559 aa12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 CTSOP43234 321 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 PTGES3Q15185 160 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 ST3GAL2Q16842 350 aa12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 ZSWIM7Q19AV6 140 aa12.66□□□□□ -0.38
SYNGAP1-204ENST00000449372 BEND4Q6ZU67 534 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms