RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LPGAT1Q92604 370 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 DACH2Q96NX9 599 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TM9SF2Q99805 663 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 NUDT16L1Q9BRJ7 211 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ACTR6Q9GZN1 396 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FBXO8Q9NRD0 319 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 METRNQ9UJH8 293 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FADS2P1A8MWK0 482 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM25AB3EWG3 89 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM25CB3EWG5 89 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM25GB3EWG6 89 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 RNF13O43567 381 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 MGRN1O60291 552 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 LGI1O95970 557 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 UBTFL6P0CB48 400 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRIM23P36406 574 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC18A2Q05940 514 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FGFBP1Q14512 234 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 C5orf22Q49AR2 442 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CDKL4Q5MAI5 379 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF662Q6ZS27 426 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OLIG1Q8TAK6 271 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PINK1Q9BXM7 581 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM192AQ9GZU8 254 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 SMOXQ9NWM0 555 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ABCA1O95477 2261 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR5H15A6NDH6 313 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ANKRD28O15084 1053 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 NSA2O95478 260 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF35P13682 527 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 APEHP13798 732 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MMP11P24347 488 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 GSK3BP49841 420 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 AKR1D1P51857 326 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ELAVL1Q15717 326 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 AGBL2Q5U5Z8 902 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 USP51Q70EK9 711 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 LIMS2Q7Z4I7 341 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC2A12Q8TD20 617 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 RFT1Q96AA3 541 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 A0A1W2PRG6 482 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 H0YIG0 161 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MANBAO00462 879 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 EMC8O43402 210 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZG16O60844 167 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 DUSP2Q05923 314 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM108Q6UXF1 575 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ACOT4Q8N9L9 421 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 TAS2R10Q9NYW0 307 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 IGHV3-20A0A0C4DH32 117 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 IGHV5-10-1A0A0J9YXX1 117 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC22A20A6NK97 555 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPR171O14626 319 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MC2RQ01718 297 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MPP2Q14168 576 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 TBR1Q16650 682 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SAMD4BQ5PRF9 694 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ARMC4Q5T2S8 1044 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 CDC73Q6P1J9 531 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 GOLGA7Q7Z5G4 137 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 GLB1L3Q8NCI6 653 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 RAB39BQ96DA2 213 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 KCTD14Q9BQ13 255 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MYNNQ9NPC7 610 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 P2RX2Q9UBL9 471 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 PLEKHA6Q9Y2H5 1048 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF462Q96JM2 2506 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SIX3O95343 332 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 RENP00797 406 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 IL6P05231 212 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 EFNA1P20827 205 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 CMTM4Q8IZR5 234 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 GCNT2Q8N0V5 402 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 PDPRQ8NCN5 879 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 GRHL3Q8TE85 626 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC38A4Q969I6 547 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 OLFM3Q96PB7 478 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 PIGQQ9BRB3 760 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 IKZF2Q9UKS7 526 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 STX16-NPEPL1H3BU86 382 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 TK2O00142 265 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 STX16O14662 325 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 BIRC5O15392 142 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 RGS5O15539 181 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 BCAP31P51572 246 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 PSPHP78330 225 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ARF1P84077 181 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 DLG1Q12959 904 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 HBMQ6B0K9 141 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 RGS9BPQ6ZS82 235 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 FGD2Q7Z6J4 655 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MTDHQ86UE4 582 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 RETREG3Q86VR2 466 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF440Q8IYI8 595 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC25A45Q8N413 288 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR4F6Q8NGB9 312 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR4C15Q8NGM1 316 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 PHF10Q8WUB8 498 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 KAT2AQ92830 837 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC45A3Q96JT2 553 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms