RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 VPS26BQ4G0F5 336 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 RTL6Q6ICC9 239 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC2A7Q6PXP3 512 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 BLOC1S3Q6QNY0 202 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF551Q7Z340 670 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 R3HCC1LQ7Z5L2 792 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 TMEM200AQ86VY9 491 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 FAM9CQ8IZT9 166 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ADCY4Q8NFM4 1077 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 LRRC37BQ96QE4 947 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 OR52E6Q96RD3 313 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 PELOQ9BRX2 385 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 INPP5KQ9BT40 448 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 DUSP26Q9BV47 211 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 EXO5Q9H790 373 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 SH2D2AQ9NP31 389 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ACKR4Q9NPB9 350 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ARL8BQ9NVJ2 186 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 QPCTLQ9NXS2 382 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 TUBA8Q9NY65 449 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 CNIH4Q9P003 139 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 BOKQ9UMX3 212 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 EDARQ9UNE0 448 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 FAM215AQ9Y5M1 114 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 LIPGQ9Y5X9 500 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ARHGAP21Q5T5U3 1957 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 A0A0G2JNJ9 132 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 LOC100653049A0A140TA62 436 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 CAPN14A8MX76 684 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 MYO1GB0I1T2 1018 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 FBP2O00757 339 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 PDPK1O15530 556 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 SCN2BO60939 215 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 DCTN3O75935 186 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 KRT34O76011 436 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 C6orf47O95873 294 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 PGRP06401 933 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 CPMP14384 443 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 CDK9P50750 372 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 ART1P52961 327 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 HSPB3Q12988 150 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 RCAN2Q14206 197 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 C1orf185Q5T7R7 199 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 RIPPLY2Q5TAB7 128 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 DNAJC14Q6Y2X3 702 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 CAMKMTQ7Z624 323 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 RETREG3Q86VR2 466 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 CCDC116Q8IYX3 515 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 OR9A2Q8NGT5 310 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 PAQR8Q8TEZ7 354 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 MTERF3Q96E29 417 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 SPACA9Q96E40 222 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 SPDL1Q96EA4 605 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 BBS4Q96RK4 519 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 GLIPR2Q9H4G4 154 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 ANKRA2Q9H9E1 313 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 ZFP64Q9NPA5 681 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 TAS2R7Q9NYW3 318 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 B4GALT7Q9UBV7 327 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 Q9UFV3 132 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF780BQ9Y6R6 833 aa12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 NUP214P35658 2090 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-213ENST00000448520 HRKO00198 91 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 NME6O75414 186 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 CPSF4O95639 269 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 C1QCP02747 245 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 ABCB1P08183 1280 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 CT62P0C5K7 136 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 CSNK2A2P19784 350 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 NT5EP21589 574 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 DNAJA1P31689 397 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 GALNSP34059 522 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 SOX18P35713 384 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 PIGAP37287 484 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 RPL3P39023 403 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 CDKN2CP42773 168 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 CPA2P48052 419 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 NCBP2P52298 156 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 GTDC1Q4AE62 458 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 PAGE3Q5JUK9 113 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 FAM111BQ6SJ93 734 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 ARSKQ6UWY0 536 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC29A4Q7RTT9 530 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 ST13P4Q8IZP2 240 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 CLEC4FQ8N1N0 589 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 LRRC25Q8N386 305 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 GLB1L3Q8NCI6 653 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 SIMC1Q8NDZ2 872 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 OR8J2Q8NGG1 315 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 KAT2AQ92830 837 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 NINJ1Q92982 152 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 LRRC46Q96FV0 321 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 FBXL20Q96IG2 436 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 AMDHD1Q96NU7 426 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 PRPF18Q99633 342 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms