RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 MAN2B1O00754 1011 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 TBX19O60806 448 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 CHRNB1P11230 501 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 DRD2P14416 443 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 TRIM23P36406 574 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 SLC1A3P43003 542 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 MAP2K3P46734 347 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 BNC1Q01954 994 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 TRAM2Q15035 370 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.1□□□□□ -0.47
SHC1-210ENST00000448116 ENTPD8Q5MY95 495 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 BHLHB9Q6PI77 547 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 SYCE2Q6PIF2 218 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 SMARCD3Q6STE5 483 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 DGLUCYQ7Z3D6 616 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 KLBQ86Z14 1044 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 NRMQ8IXM6 262 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 NUP43Q8NFH3 380 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 MRPS30Q9NP92 439 aaKnown RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 RPRD1BQ9NQG5 326 aaKnown RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 EXOSC1Q9Y3B2 195 aaKnown RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 A0A0A6YYD5 115 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 A0A1B0GVC2 190 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 A6NIN4 97 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 C4orf51C9J302 202 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 FCMRO60667 390 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 CPNE3O75131 537 aaKnown RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 TRHRP34981 398 aaPredicted RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 SLC16A1P53985 500 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 CLDN2P57739 230 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 TPBGQ13641 420 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 QSOX2Q6ZRP7 698 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 LINC00471Q8N535 108 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 SPRYD4Q8WW59 207 aaPredicted RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 FCRL4Q96PJ5 515 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 OR7D2Q96RA2 312 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 PTGFRNQ9P2B2 879 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 SF3B6Q9Y3B4 125 aaKnown RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 A0A0B4J293 547 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 IGKV1-8A0A0C4DH67 115 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 A0A0G2JPF8 293 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 GSAPA4D1B5 854 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 HNRNPCL2B2RXH8 293 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 HNRNPCL3B7ZW38 293 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 AIFM1O95831 613 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 YES1P07947 543 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 HNRNPCL4P0DMR1 293 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 CSNK2A2P19784 350 aaPredicted RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 HSD17B2P37059 387 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 RPS5P46782 204 aaKnown RBP12.1□□□□□ -0.47
SHC1-210ENST00000448116 GAS1P54826 345 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 TATDN3Q17R31 274 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 MINDY4Q4G0A6 757 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 OR51G2Q8NGK0 314 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 OR2A1Q8NGT9 310 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 GANCQ8TET4 914 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 RNF31Q96EP0 1072 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 CAMK1GQ96NX5 476 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 MCHR1Q99705 422 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 WACQ9BTA9 647 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 HDHD2Q9H0R4 259 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 KLHL28Q9NXS3 571 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 SCN3AQ9NY46 2000 aa12.1□□□□□ -0.47
SHC1-210ENST00000448116 TMEM129A0AVI4 362 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 C1QTNF3-AMACRE9PGA6 284 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 DVL2O14641 736 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 PIP5K1CO60331 668 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 CLEC3AO75596 197 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 HIST1H1TP22492 207 aaPredicted RBP12.09□□□□□ -0.47
SHC1-210ENST00000448116 GABRA5P31644 462 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 IL12RB1P42701 662 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 CTBP2P56545 445 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 PRR5P85299 388 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 ST3GAL3Q11203 375 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 GNA13Q14344 377 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 C21orf62-AS1Q17RA5 79 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 CD300LDQ6UXZ3 194 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 ARSGQ96EG1 525 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 ARHGAP9Q9BRR9 750 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 PINK1Q9BXM7 581 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 TEX12Q9BXU0 123 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 FGF20Q9NP95 211 aaPredicted RBP12.09□□□□□ -0.47
SHC1-210ENST00000448116 GIMAP4Q9NUV9 329 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 ATG2BQ96BY7 2078 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 LOC102723532A0A0G2JNH3 316 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 SOCS6O14544 535 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 PPP3R1P63098 170 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 MLF2Q15773 248 aaPredicted RBP12.09□□□□□ -0.47
SHC1-210ENST00000448116 TMEM52BQ4KMG9 183 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 IDNKQ5T6J7 187 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 RNLSQ5VYX0 342 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 OR4Q3Q8NH05 313 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 ADAMTS15Q8TE58 950 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 TRIM43Q96BQ3 446 aaPredicted RBP12.09□□□□□ -0.47
SHC1-210ENST00000448116 C6orf106Q9H6K1 298 aaPredicted RBP12.09□□□□□ -0.47
SHC1-210ENST00000448116 ZC3H12DA2A288 527 aaKnown RBP12.09□□□□□ -0.47
SHC1-210ENST00000448116 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 STK25O00506 426 aa12.09□□□□□ -0.47
SHC1-210ENST00000448116 GABRPO00591 440 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms