RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SH2B3Q9UQQ2 575 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 A0A1B0GVT2 93 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC9B1P1A6NJY1 282 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 KIR2DL3P43628 341 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ALKAL1Q6UXT8 129 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SERPINA11Q86U17 422 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 CMTM1Q8IZ96 169 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 GALNT6Q8NCL4 622 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC30A2Q9BRI3 323 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 PCDHAC1Q9H158 963 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC7A8Q9UHI5 535 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 KCNS2Q9ULS6 477 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF337Q9Y3M9 751 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 RNF215Q9Y6U7 377 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 LOC105369274A0A096LPK9 316 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 TRBV2A0A0J9YWF9 115 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 OR6C65A6NJZ3 312 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 INMTO95050 263 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 GPR75O95800 540 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 IFNA5P01569 189 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 IL1RNP18510 177 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 IDUAP35475 653 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM52BQ4KMG9 183 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ESCO2Q56NI9 601 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLX4IPQ5VYV7 408 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 KCTD20Q7Z5Y7 419 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 LRRTM3Q86VH5 581 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SPAG16Q8N0X2 631 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 OR4N4Q8N0Y3 316 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 MMP21Q8N119 569 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF611Q8N823 705 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ACOT4Q8N9L9 421 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC7A13Q8TCU3 470 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 THAP3Q8WTV1 239 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 HSD3B7Q9H2F3 369 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC6A15Q9H2J7 730 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 TMLHEQ9NVH6 421 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SARDHQ9UL12 918 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ENPP4Q9Y6X5 453 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 MARF1Q9Y4F3 1742 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 GON4LQ3T8J9 2241 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 NPIPB15A6NHN6 443 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 FCGR2AP12318 317 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 AMY2BP19961 511 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 GNRHRP30968 328 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 CTXN1P60606 82 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 PRDX1Q06830 199 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 LRRC26Q2I0M4 334 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 GGTA1PQ4G0N0 100 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 FCRL3Q96P31 734 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 TESQ9UGI8 421 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 PRELID3BQ9Y3B1 194 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC43A1O75387 559 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 IGHG1P01857 330 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 HIST1H1TP22492 207 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 GDF1P27539 372 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 XCR1P46094 333 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 CYCSP99999 105 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 C17orf67Q0P5P2 114 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 CST9Q5W186 159 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 TRAPPC6BQ86SZ2 158 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 RNF113BQ8IZP6 322 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 OR9K2Q8NGE7 335 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 MICU1Q9BPX6 476 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 HCFC1R1Q9NWW0 138 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 THAP10Q9P2Z0 257 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 URB1O60287 2271 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 TYROBPO43914 113 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ABLIM3O94929 683 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 RASAL1O95294 804 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 CHRM5P08912 532 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 TSTQ16762 297 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 LRFN4Q6PJG9 635 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 UBQLNLQ8IYU4 475 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 RCBTB1Q8NDN9 531 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 OR1J4Q8NGS1 313 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 HSPBAP1Q96EW2 488 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC46A1Q96NT5 459 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ABCG2Q9UNQ0 655 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 A0A087WUU8 490 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TRBV11-1A0A0K0K1C0 115 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TRIM64BA6NI03 449 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ANHXE9PGG2 379 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 HSD17B1P14061 328 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SLC35G1Q2M3R5 365 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 WSCD2Q2TBF2 565 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CYP27C1Q4G0S4 372 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 RNASE12Q5GAN4 147 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 MARCH8Q5T0T0 291 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SLC6A19Q695T7 634 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 WDSUB1Q8N9V3 476 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 RRNAD1Q96FB5 475 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 COG8Q96MW5 612 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 HIPK2Q9H2X6 1198 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CCDC86Q9H6F5 360 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 DYNLRB1Q9NP97 96 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 RNF6Q9Y252 685 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 OR6C70A6NIJ9 312 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 FBP2O00757 339 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms