RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 IL20RBQ6UXL0 311 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 OLIG3Q7RTU3 272 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 NET1Q7Z628 596 aaPredicted RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 ZZZ3Q8IYH5 903 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 FDCSPQ8NFU4 85 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 NFKBIDQ8NI38 313 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ASB15Q8WXK1 588 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 EFHD2Q96C19 240 aaPredicted RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 CLPTM1LQ96KA5 538 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 LRMDAQ9H2I8 198 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ZNF552Q9H707 407 aaPredicted RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 ABI3Q9P2A4 366 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 CFAP47Q6ZTR5 3102 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ACACAQ13085 2346 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 CHD8Q9HCK8 2581 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ZFHX4Q86UP3 3567 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 H6PDO95479 791 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 IL33O95760 270 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ARAFP10398 606 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 NAGAP17050 411 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 IL12BP29460 328 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 SPATS1Q496A3 300 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 REEP3Q6NUK4 255 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ERICH5Q6P6B1 374 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 MICU2Q8IYU8 434 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 FAM156AQ8NDB6 213 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 OR5M3Q8NGP4 307 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 DIO2Q92813 273 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 TMEM19Q96HH6 336 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 MTHFD2LQ9H903 347 aaPredicted RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 CALML5Q9NZT1 146 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 MKLN1Q9UL63 735 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ZMIZ1Q9ULJ6 1067 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 PDE5AO76074 875 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 OR6B1O95007 311 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 SOX3P41225 446 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 CRISP3P54108 245 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 HPCAP84074 193 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 CHRNEQ04844 493 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 FUT5Q11128 374 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 MAPK11Q15759 364 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 LRRC74BQ6ZQY2 392 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 ASRGL1Q7L266 308 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 BEST3Q8N1M1 668 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 FBXW8Q8N3Y1 598 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 METTL25Q8N6Q8 603 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 TNIP2Q8NFZ5 429 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
SGCE-206ENST00000445866 COL21A1Q96P44 957 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 ANKRD10Q9NXR5 420 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 PLA2G3Q9NZ20 509 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 WDR45Q9Y484 360 aa16.04■□□□□ 0.16
SGCE-206ENST00000445866 A0A0G2JPF8 293 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 FAM220BPB1ANY3 271 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HNRNPCL2B2RXH8 293 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HNRNPCL3B7ZW38 293 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HS6ST1O60243 411 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 TSPAN2O60636 221 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 GMNNO75496 209 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 PPM1BO75688 479 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 PGM3O95394 542 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 CHRM4P08173 479 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 FBXO45P0C2W1 286 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HNRNPCL4P0DMR1 293 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HSD17B1P14061 328 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 ME2P23368 584 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HLCSP50747 726 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 PNLIPRP2P54317 469 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 FBXW4P57775 412 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 OC90Q02509 493 aaPredicted RBP16.03■□□□□ 0.16
SGCE-206ENST00000445866 GPR68Q15743 365 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.03■□□□□ 0.16
SGCE-206ENST00000445866 FLYWCH1Q4VC44 716 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 ZNF468Q5VIY5 522 aaPredicted RBP16.03■□□□□ 0.16
SGCE-206ENST00000445866 DESI1Q6ICB0 168 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 ZAR1Q86SH2 424 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HPS6Q86YV9 775 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 FAM13CQ8NE31 585 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 HIPK4Q8NE63 616 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 EXTL1Q92935 676 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 TREX2Q9BQ50 279 aaPredicted RBP16.03■□□□□ 0.16
SGCE-206ENST00000445866 HPF1Q9NWY4 346 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 EGFL7Q9UHF1 273 aa16.03■□□□□ 0.16
SGCE-206ENST00000445866 UGT2B11O75310 529 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 CEACAM4O75871 244 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 SORBS2O94875 1100 aaKnown RBP16.02■□□□□ 0.16
SGCE-206ENST00000445866 WDPCPO95876 746 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 F10P00742 488 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 HTR1EP28566 365 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 AQP1P29972 269 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 TMED10P49755 219 aaKnown RBP16.02■□□□□ 0.16
SGCE-206ENST00000445866 VEZF1Q14119 521 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 EFR3AQ14156 821 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 ZNF791Q3KP31 576 aaPredicted RBP16.02■□□□□ 0.16
SGCE-206ENST00000445866 RPS26P11Q5JNZ5 115 aaPredicted RBP16.02■□□□□ 0.16
SGCE-206ENST00000445866 LYPD8Q6UX82 237 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 NUP54Q7Z3B4 507 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 SLC30A8Q8IWU4 369 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 ZG16BQ96DA0 208 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 UTP23Q9BRU9 249 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms