RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 CLEC1BQ9P126 229 aa16.66■□□□□ 0.26
CLDN9-201ENST00000445369 PILRAQ9UKJ1 303 aa16.66■□□□□ 0.26
CLDN9-201ENST00000445369 SSR3Q9UNL2 185 aa16.66■□□□□ 0.26
CLDN9-201ENST00000445369 CARD8Q9Y2G2 431 aa16.66■□□□□ 0.26
CLDN9-201ENST00000445369 GPR52Q9Y2T5 361 aa16.66■□□□□ 0.26
CLDN9-201ENST00000445369 CAB39Q9Y376 341 aaPredicted RBP16.66■□□□□ 0.26
CLDN9-201ENST00000445369 MN1Q10571 1320 aaPredicted RBP16.66■□□□□ 0.26
CLDN9-201ENST00000445369 TNFRSF10CO14798 259 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 ZSCAN9O15535 394 aaPredicted RBP16.65■□□□□ 0.26
CLDN9-201ENST00000445369 AQP9O43315 295 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 KLF4O43474 513 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 B3GALT2O43825 422 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 DNAJB6O75190 326 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 OR5F1O95221 314 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 IMPDH2P12268 514 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 MYL12AP19105 171 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 WNT4P56705 351 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 SIM1P81133 766 aaPredicted RBP16.65■□□□□ 0.26
CLDN9-201ENST00000445369 ARHGAP11BQ3KRB8 267 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 USP53Q70EK8 1073 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 ANKK1Q8NFD2 765 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 SLC9A6Q92581 669 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 HTRA1Q92743 480 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 SLC30A2Q9BRI3 323 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 PRRG3Q9BZD7 231 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 ACTR10Q9NZ32 417 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 PTGFRNQ9P2B2 879 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 WDR45Q9Y484 360 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 MYO9BQ13459 2157 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 SCN2AQ99250 2005 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 TMEM129A0AVI4 362 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 URADA6NGE7 173 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 SNTNA6NMZ2 147 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 STAT5AP42229 794 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 BNC1Q01954 994 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 DUSP5Q16690 384 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 FIGLAQ6QHK4 219 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 ZNF836Q6ZNA1 936 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 RRM2BQ7LG56 351 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 GDF7Q7Z4P5 450 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 OR4N5Q8IXE1 308 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 SLC41A3Q96GZ6 507 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 MTHFD2LQ9H903 347 aaPredicted RBP16.65■□□□□ 0.26
CLDN9-201ENST00000445369 SLC22A7Q9Y694 548 aa16.65■□□□□ 0.26
CLDN9-201ENST00000445369 CPMP14384 443 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 GNSP15586 552 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 POLR2CP19387 275 aaPredicted RBP16.64■□□□□ 0.25
CLDN9-201ENST00000445369 TNFSF8P32971 234 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 MTNR1AP48039 350 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 RORCP51449 518 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 GPR18Q14330 331 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 ALG11Q2TAA5 492 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 ZNF628Q5EBL2 1059 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 CLEC12AQ5QGZ9 265 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 KIAA1324Q6UXG2 1013 aaKnown RBP16.64■□□□□ 0.25
CLDN9-201ENST00000445369 POGLUT1Q8NBL1 392 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 CAMKVQ8NCB2 501 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 FLCNQ8NFG4 579 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 OR4Q3Q8NH05 313 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 CEP19Q96LK0 163 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 NELL2Q99435 816 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 CCDC32Q9BV29 185 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 TXNL4BQ9NX01 149 aaKnown RBP16.64■□□□□ 0.25
CLDN9-201ENST00000445369 IL20Q9NYY1 176 aa16.64■□□□□ 0.25
CLDN9-201ENST00000445369 LOC105369274A0A096LPK9 316 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 LOC102723532A0A0G2JNH3 316 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 STK25O00506 426 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 KCNK2O95069 426 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 APOL3O95236 402 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 TLX1P31314 330 aaPredicted RBP16.63■□□□□ 0.25
CLDN9-201ENST00000445369 SRP54P61011 504 aaKnown RBP16.63■□□□□ 0.25
CLDN9-201ENST00000445369 DLX2Q07687 328 aaPredicted RBP16.63■□□□□ 0.25
CLDN9-201ENST00000445369 HTR4Q13639 388 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 EXOSC6Q5RKV6 272 aaKnown RBP16.63■□□□□ 0.25
CLDN9-201ENST00000445369 FHL5Q5TD97 284 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 OR2G6Q5TZ20 316 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 MBOAT2Q6ZWT7 520 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 C11orf74Q86VG3 221 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 NRMQ8IXM6 262 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 PEX5LQ8IYB4 626 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 OR4N4Q8N0Y3 316 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 OR10G6Q8NH81 332 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 TM9SF4Q92544 642 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 OSTF1Q92882 214 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 ISYNA1Q9NPH2 558 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 SNTG1Q9NSN8 517 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 TRAPPC4Q9Y296 219 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 EXOSC1Q9Y3B2 195 aaKnown RBP16.63■□□□□ 0.25
CLDN9-201ENST00000445369 SPIN1Q9Y657 262 aaPredicted RBP16.63■□□□□ 0.25
CLDN9-201ENST00000445369 CENPVL1A0A0U1RR11 272 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 OR6C74A6NCV1 312 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 SURF4O15260 269 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 PIP5K1CO60331 668 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 DLGAP3O95886 979 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 SPNP16150 400 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 NDUFV2P19404 249 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 GPR4P46093 362 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 EEF1A1P68104 462 aaKnown RBP16.63■□□□□ 0.25
CLDN9-201ENST00000445369 DUSP8Q13202 625 aa16.63■□□□□ 0.25
CLDN9-201ENST00000445369 LARS2Q15031 903 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms