RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 DUSP5Q16690 384 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 TBC1D25Q3MII6 688 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 KLHL22Q53GT1 634 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 C3orf38Q5JPI3 329 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 PLEKHG7Q6ZR37 379 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 PLEKHM3Q6ZWE6 761 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 SLC22A18ASQ8N1D0 253 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 DEFB123Q8N688 67 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 OR13H1Q8NG92 308 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 OR8D4Q8NGM9 314 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 FAM3CQ92520 227 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 RERGQ96A58 199 aaPredicted RBP13.21□□□□□ -0.29
NCLP1-201ENST00000445357 COL26A1Q96A83 441 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 C6orf62Q9GZU0 229 aaPredicted RBP13.21□□□□□ -0.29
NCLP1-201ENST00000445357 SAP130Q9H0E3 1048 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 PIGUQ9H490 435 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 IL21RQ9HBE5 538 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 FGF20Q9NP95 211 aaPredicted RBP13.21□□□□□ -0.29
NCLP1-201ENST00000445357 TMEM74BQ9NUR3 256 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 NDUFB11Q9NX14 153 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 USP36Q9P275 1121 aaKnown RBP13.21□□□□□ -0.29
NCLP1-201ENST00000445357 CD207Q9UJ71 328 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 MRPS2Q9Y399 296 aaKnown RBP13.21□□□□□ -0.29
NCLP1-201ENST00000445357 WDR45Q9Y484 360 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 PEX16Q9Y5Y5 336 aa13.21□□□□□ -0.29
NCLP1-201ENST00000445357 COL6A3P12111 3177 aa13.21□□□□□ -0.3
NCLP1-201ENST00000445357 A0A087WV62 115 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 A0A0J9YY10 115 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ISPDA4D126 451 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 OR5K4A6NMS3 321 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 PRODHO43272 600 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 KLF4O43474 513 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 UPK1BO75841 260 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ATP1B1P05026 303 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 CDH3P22223 829 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SOX6P35712 828 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ETV6P41212 452 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 STAT5AP42229 794 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 AVPR1BP47901 424 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF45Q02386 682 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 DUSP8Q13202 625 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 C1DQ13901 141 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 LARS2Q15031 903 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF836Q6ZNA1 936 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SNX29P2Q8IUI4 249 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 OR4N5Q8IXE1 308 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 PEX5LQ8IYB4 626 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF655Q8N720 491 aaPredicted RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SMRP1Q8NCR6 262 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 PATE1Q8WXA2 126 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SLC9A6Q92581 669 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 MCHR1Q99705 422 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 GSDMCQ9BYG8 508 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 PRRG3Q9BZD7 231 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF350Q9GZX5 532 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SIAEQ9HAT2 523 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF232Q9UNY5 417 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 UGT2A1Q9Y4X1 527 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SPACA6W5XKT8 324 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 A0A075B6Q4 140 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 KIR2DS5A0A0G2JLQ3 304 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 A0A0G2JNG1 304 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SNTNA6NMZ2 147 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 KDM4EB2RXH2 506 aaPredicted RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 PRAMEF26H0Y7S4 382 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 KIR2DS3K7RE56 304 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 MYL12BO14950 172 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 IGLV3-19P01714 112 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 THY1P04216 161 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 RPS4Y1P22090 263 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 S100A5P33763 92 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 CCR5P51681 352 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 RPS3AP61247 264 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 EEF1A1P68104 462 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 RAB40BQ12829 278 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 CCINQ13939 588 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 KIR2DS5Q14953 304 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF181Q2M3W8 571 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 MINDY4Q4G0A6 757 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 EIPR1Q53HC9 387 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 MBOAT2Q6ZWT7 520 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 GDF7Q7Z4P5 450 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 POGLUT1Q8NBL1 392 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SLC41A3Q96GZ6 507 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 FAM46AQ96IP4 442 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SLC38A2Q96QD8 506 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SDF2Q99470 211 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 CACYBPQ9HB71 228 aaKnown RBP13.2□□□□□ -0.3
NCLP1-201ENST00000445357 GPR27Q9NS67 375 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 SATB2Q9UPW6 733 aa13.2□□□□□ -0.3
NCLP1-201ENST00000445357 BRWD1Q9NSI6 2320 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 PLOD3O60568 738 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 PVRP15151 417 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms