RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CCDC28AQ8IWP9 274 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 NSMAFQ92636 917 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 GTPBP2Q9BX10 602 aaKnown RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 DPH1Q9BZG8 443 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 OR5K4A6NMS3 321 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 ITGBL1O95965 494 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 ELAVL4P26378 380 aaKnown RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 NKG7Q16617 165 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF613Q6PF04 617 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 PAQR7Q86WK9 346 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 FAM83FQ8NEG4 500 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 SPRYD4Q8WW59 207 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 THAP4Q8WY91 577 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 NPAP1Q9NZP6 1156 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 CCL26Q9Y258 94 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 M0R233 179 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 TIMP1P01033 207 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 BMP1P13497 986 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 AK4P27144 223 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 MLLT3P42568 568 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 TSPAN5P62079 268 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 SNRPGP62308 76 aaKnown RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 AQP6Q13520 282 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 FAHD1Q6P587 224 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 RNF165Q6ZSG1 346 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 MRPL43Q8N983 215 aaKnown RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 TXNDC15Q96J42 360 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 SERINC2Q96SA4 455 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 DOK1Q99704 481 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 BTBD2Q9BX70 525 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 IFT46Q9NQC8 304 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 DIMT1Q9UNQ2 313 aaKnown RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 A0A1W2PPK0 400 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 PSMB5P28074 263 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 PITPNBP48739 271 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 PSMA6P60900 246 aaKnown RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 PGGHGQ32M88 737 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 SLC22A10Q63ZE4 541 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 DNM1P34Q6PK57 102 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 FIGLAQ6QHK4 219 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 ARMCX6Q7L4S7 300 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF627Q7L945 461 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 PRSS58Q8IYP2 241 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 CSNK1A1LQ8N752 337 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 RGS17Q9UGC6 210 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-206ENST00000445265 CLEC4EQ9ULY5 219 aa15.68■□□□□ 0.1
TCOF1-206ENST00000445265 CEBPBP17676 345 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 SSTR4P31391 388 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 PLK5Q496M5 336 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 EOGTQ5NDL2 527 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 METAP1DQ6UB28 335 aaPredicted RBP15.67■□□□□ 0.1
TCOF1-206ENST00000445265 PTOV1Q86YD1 416 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 TIGD4Q8IY51 512 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 LRRC56Q8IYG6 542 aaPredicted RBP15.67■□□□□ 0.1
TCOF1-206ENST00000445265 DTX3Q8N9I9 347 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 PITX2Q99697 317 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 PRTFDC1Q9NRG1 225 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 NEU3Q9UQ49 428 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 RPL6Q02878 288 aaKnown RBP15.67■□□□□ 0.1
TCOF1-206ENST00000445265 ALG10BQ5I7T1 473 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 WDR20Q8TBZ3 569 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 TMEM239Q8WW34 195 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 YIPF6Q96EC8 236 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 OR7D2Q96RA2 312 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 DDX31Q9H8H2 851 aaKnown RBP15.67■□□□□ 0.1
TCOF1-206ENST00000445265 ACER3Q9NUN7 267 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 OR52A4PA6NMU1 304 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 RNH1P13489 461 aaKnown RBP15.67■□□□□ 0.1
TCOF1-206ENST00000445265 TYRP1P17643 537 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 TCEA1P23193 301 aaKnown RBP15.67■□□□□ 0.1
TCOF1-206ENST00000445265 GABRA5P31644 462 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 AHRP35869 848 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 OR2G6Q5TZ20 316 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 SLC7A5P1Q8MH63 180 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 C1QTNF2Q9BXJ5 285 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 RDH8Q9NYR8 311 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 KLHL21Q9UJP4 597 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 FER1L6Q2WGJ9 1857 aa15.67■□□□□ 0.1
TCOF1-206ENST00000445265 SMCO1Q147U7 214 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 SLC25A25Q6KCM7 469 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 OR52E2Q8NGJ4 325 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TRMT10AQ8TBZ6 339 aaKnown RBP15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TMEM14AQ9Y6G1 99 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TMEM202A6NGA9 273 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 PIPP12273 146 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-206ENST00000445265 IGFBP4P22692 258 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 HTR2BP41595 481 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 SOX2P48431 317 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 CAMK1Q14012 370 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TMEM69Q5SWH9 247 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 OR52E1Q8NGJ3 308 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 OR5W2Q8NH69 310 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 NKD1Q969G9 470 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TM4SF18Q96CE8 201 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TIMM29Q9BSF4 260 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 MED17Q9NVC6 651 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 A8MUA0 341 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TMX2-CTNND1H3BSU7 103 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TOMM20Q15388 145 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 LRRN1Q6UXK5 716 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms