RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 KRT31Q15323 416 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 PCK2Q16822 640 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 TMEM44Q2T9K0 475 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 KRT71Q3SY84 523 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 C12orf60Q5U649 245 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 AGAP7PQ5VUJ5 663 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 SPECC1LQ69YQ0 1117 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 PRR5LQ6MZQ0 368 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 ARMCX5Q6P1M9 558 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 RFWD3Q6PCD5 774 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 RAPH1Q70E73 1250 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 BLIDQ8IZY5 108 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF491Q8N8L2 437 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 RTL3Q8N8U3 475 aaKnown RBP3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 OR1K1Q8NGR3 316 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 OR2L2Q8NH16 312 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 PSMA8Q8TAA3 256 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 P3H4Q92791 437 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 TOMM40LQ969M1 308 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC51Q96ER9 411 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 DTD2Q96FN9 168 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF560Q96MR9 790 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 SPATA13Q96N96 652 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 GSDMAQ96QA5 445 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 DCTN5Q9BTE1 182 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC94Q9BW85 323 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 RSPH9Q9H1X1 276 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 TMEM245Q9H330 911 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 C6orf50Q9HD87 102 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 APPL1Q9UKG1 709 aa3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 MRPS2Q9Y399 296 aaKnown RBP3.54□□□□□ -1.84
HMGB3P6-201ENST00000444896 C10orf71Q711Q0 1435 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 DDX60LQ5H9U9 1706 aaKnown RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 NOTCH3Q9UM47 2321 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 USP27XA6NNY8 438 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 MEI4A8MW99 385 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 PHF1O43189 567 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 TSPAN2O60636 221 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 DUSP11O75319 330 aaKnown RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 BBOX1O75936 387 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 MT-ND1P03886 318 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 FERP16591 822 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF18P17022 549 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 PRPHP41219 470 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 PPP1R2P41236 205 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 BTDP43251 543 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 NAPAP54920 295 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 GEMP55040 296 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 YBEYP58557 167 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 ARF5P84085 180 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 NCBP1Q09161 790 aaKnown RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF506Q5JVG8 444 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 C1orf189Q5VU69 101 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 PRAMEF7Q5VXH5 474 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 RHBDD2Q6NTF9 364 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 PLBD1Q6P4A8 553 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 CDC20BQ86Y33 519 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 MNS1Q8NEH6 495 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF397Q8NF99 534 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 UBE2Q2Q8WVN8 375 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 ITLN1Q8WWA0 313 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 ANKRD7Q92527 254 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 RAB39BQ96DA2 213 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 C16orf58Q96GQ5 468 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 PAGE5Q96GU1 130 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 C1orf147Q96MC9 270 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 SPAG8Q99932 426 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 ACAT2Q9BWD1 397 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 SPZ1Q9BXG8 430 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 RAB34Q9BZG1 259 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 CARD9Q9H257 536 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 HSD3B7Q9H2F3 369 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 CD209Q9NNX6 404 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 PRMT8Q9NR22 394 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 RWDD2AQ9UIY3 292 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 TDRKHQ9Y2W6 561 aaKnown RBP3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 CPQQ9Y646 472 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 UBR3Q6ZT12 1888 aa3.53□□□□□ -1.84
HMGB3P6-201ENST00000444896 MYH8P13535 1937 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 PLIN4Q96Q06 1357 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 GAKO14976 1311 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 AFF2P51816 1311 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 FAM205AQ6ZU69 1335 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 MYO3BQ8WXR4 1341 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 ESYT2A0FGR8 921 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 BICDL2A1A5D9 508 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 DDX39AO00148 427 aaKnown RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 NMT2O60551 498 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 FCER2P06734 321 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 SFTPBP07988 381 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 ABHD2P08910 425 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 P4HA1P13674 534 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 AREGP15514 252 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 CASQ1P31415 396 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 SPRP35270 261 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRIM23P36406 574 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 ALDH3B1P43353 468 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 NSFP46459 744 aaKnown RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 PITPNBP48739 271 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 RGS19P49795 217 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms