RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FOXO1Q12778 655 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SNTA1Q13424 505 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 RCAN2Q14206 197 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SAXO2Q658L1 398 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SLC30A6Q6NXT4 461 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 FIGNL1Q6PIW4 674 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SLC2A7Q6PXP3 512 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 PACS2Q86VP3 889 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SIAH3Q8IW03 269 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 FAM110BQ8TC76 370 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 GTF2H4Q92759 462 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 CDS1Q92903 461 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SPDL1Q96EA4 605 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 NEURL3Q96EH8 262 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 JSRP1Q96MG2 331 aaPredicted RBP11.3□□□□□ -0.6
USP1-203ENST00000442679 OR7D2Q96RA2 312 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 ZFP64Q9NPA5 681 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 KLRF1Q9NZS2 232 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 BOKQ9UMX3 212 aaPredicted RBP11.3□□□□□ -0.6
USP1-203ENST00000442679 NPIPA1Q9UND3 350 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 PCDHGB3Q9Y5G1 929 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 KCNE3Q9Y6H6 103 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 DUXAA6NLW8 204 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 ACOT7O00154 380 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 TRIM3O75382 744 aaPredicted RBP11.29□□□□□ -0.6
USP1-203ENST00000442679 GLSO94925 669 aaPredicted RBP11.29□□□□□ -0.6
USP1-203ENST00000442679 UTS2O95399 124 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 ANP32DO95626 131 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 C1QCP02747 245 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 CD1EP15812 388 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 TDGF1P3P51864 188 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 GNGT1P63211 74 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 POU6F2P78424 691 aaPredicted RBP11.29□□□□□ -0.6
USP1-203ENST00000442679 KRTCAP3Q53RY4 240 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 C6orf10Q5SRN2 563 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 TMEM81Q6P7N7 255 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 ANGPTL8Q6UXH0 198 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 GALNT10Q86SR1 603 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 SLC22A16Q86VW1 577 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 ST6GALNAC3Q8NDV1 305 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 OR5D16Q8NGK9 328 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 MIPOL1Q8TD10 442 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 NTNG2Q96CW9 530 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 ELAC2Q9BQ52 826 aaKnown RBP11.29□□□□□ -0.6
USP1-203ENST00000442679 G6PC3Q9BUM1 346 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 OSBPL11Q9BXB4 747 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 DEFB127Q9H1M4 99 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 OR51I1Q9H343 314 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 SERHL2Q9H4I8 314 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 GALNT9Q9HCQ5 603 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 SLC52A3Q9NQ40 469 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 SEC14L3Q9UDX4 400 aa11.29□□□□□ -0.6
USP1-203ENST00000442679 A0A1W2PP18 115 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 ANKUB1A6NFN9 424 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 LRRC3CA6NJW4 275 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 ASNA1O43681 348 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 FADS1O60427 444 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 UNC5CO95185 931 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 KRT75O95678 551 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 RFPL3SP0C7P2 107 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 ZCCHC18P0CG32 403 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 OR12D1P0DN82 309 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 CAPN3P20807 821 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 DRD4P21917 467 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 GNLYP22749 145 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 EVI2BP34910 448 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 PTGDSP41222 190 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 MASP1P48740 699 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 CLK3P49761 638 aaKnown RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 MRPL49Q13405 166 aaKnown RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 ELOAQ14241 798 aaKnown RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
USP1-203ENST00000442679 HYAL4Q2M3T9 481 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 DCST2Q5T1A1 773 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 CCNJQ5T5M9 372 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 TNFAIP8L2Q6P589 184 aaPredicted RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 GFRALQ6UXV0 394 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 DNAJC14Q6Y2X3 702 aaPredicted RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 BNC2Q6ZN30 1099 aaPredicted RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 SPATA21Q7Z572 469 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 CPLX4Q7Z7G2 160 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 RNF130Q86XS8 419 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 OR52N2Q8NGI0 321 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 C10orf82Q8WW14 230 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 TMEM41AQ96HV5 264 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 ZNF597Q96LX8 424 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 GPR137Q96N19 417 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 PAIP1Q9H074 479 aaKnown RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 FAM107BQ9H098 131 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
USP1-203ENST00000442679 SAR1AQ9NR31 198 aa11.28□□□□□ -0.6
USP1-203ENST00000442679 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms