RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TNK1Q13470 666 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 ZNF79Q15937 498 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 DUSP5Q16690 384 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 FAM133BQ5BKY9 247 aaKnown RBP2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 DEFB121Q5J5C9 76 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 OR4C11Q6IEV9 310 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CTR9Q6PD62 1173 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 FAM43BQ6ZT52 329 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 TMEM135Q86UB9 458 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 RCOR2Q8IZ40 523 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC22A15Q8IZD6 547 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CCDC191Q8NCU4 936 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 APPL2Q8NEU8 664 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CFAP61Q8NHU2 1237 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 JAKMIP2Q96AA8 810 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 RADILQ96JH8 1075 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 BTBD9Q96Q07 612 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 APOL2Q9BQE5 337 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 LRRCC1Q9C099 1032 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 GPR88Q9GZN0 384 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 GOLPH3LQ9H4A5 285 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 PDFQ9HBH1 243 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 GDF3Q9NR23 364 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 TBC1D13Q9NVG8 400 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CYP39A1Q9NYL5 469 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC24A2Q9UI40 661 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 GTF3C4Q9UKN8 822 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC6A5Q9Y345 797 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 MRPS18CQ9Y3D5 142 aaKnown RBP2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 TTLL3Q9Y4R7 772 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 MYH8P13535 1937 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 IGHV3-16A0A0C4DH30 117 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A1W2PPK0 400 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TMX2-CTNND1H3BSU7 103 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TXNL1O43396 289 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 RAD1O60671 282 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 MT-ND1P03886 318 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 RPLP0P05388 317 aaKnown RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 ADORA3P0DMS8 318 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 SAGP10523 405 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 ANPEPP15144 967 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 HNF1AP20823 631 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 GPR183P32249 361 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TNFRSF4P43489 277 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 GSK3BP49841 420 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 RASGEF1BQ0VAM2 473 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TAF7Q15545 349 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 NPTX1Q15818 432 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 MEA1Q16626 185 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 FAM106AQ4KMX7 169 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 RILPL1Q5EBL4 403 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 FGD3Q5JSP0 725 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 UTF1Q5T230 341 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 KPRPQ5T749 579 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 EFL1Q7Z2Z2 1120 aaKnown RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 ECHDC2Q86YB7 292 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 HSCBQ8IWL3 235 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 PRR22Q8IZ63 422 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TAGAPQ8N103 731 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 GBP7Q8N8V2 638 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 LRTM2Q8N967 370 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 RASGEF1AQ8N9B8 481 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC22A8Q8TCC7 542 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TSACCQ96A04 125 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 C11orf52Q96A22 123 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 PTERQ96BW5 349 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 NAP1L5Q96NT1 182 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 DGAT2Q96PD7 388 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TAAR6Q96RI8 345 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 SDF4Q9BRK5 362 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC2A11Q9BYW1 496 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 TRIM7Q9C029 511 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 CDH20Q9HBT6 801 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 GSN-AS1Q9NRJ2 163 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 FAM212BQ9NTI7 297 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 GIMAP4Q9NUV9 329 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 HAUS2Q9NVX0 235 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 CLIC5Q9NZA1 410 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 RAI14Q9P0K7 980 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 RPUSD1Q9UJJ7 312 aaKnown RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 CPSF3Q9UKF6 684 aaKnown RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 GPR34Q9UPC5 381 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 PRG3Q9Y2Y8 225 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 SNX8Q9Y5X2 465 aa2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 MRPS18BQ9Y676 258 aaKnown RBP2.01□□□□□ -2.09
HMGB1P18-201ENST00000438801 WDR19Q8NEZ3 1342 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A087WZ39 114 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A0U1RQS6 177 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A1B0GTH9 108 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 hCG_38984A0A1B0GV85 526 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A1W2PPM1 405 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 TMEM129A0AVI4 362 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 BICDL2A1A5D9 508 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 KIAA0513O60268 411 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 DOK2O60496 412 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 SAP30O75446 220 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 ACSL3O95573 720 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 RPN1P04843 607 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms