RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CCDC58Q4VC31 144 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 FAM209AQ5JX71 171 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 LSRQ86X29 649 aaPredicted RBP13□□□□□ -0.33
PTCHD3-201ENST00000438700 ZNF761Q86XN6 746 aaPredicted RBP13□□□□□ -0.33
PTCHD3-201ENST00000438700 UBQLNLQ8IYU4 475 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 OR9A2Q8NGT5 310 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 TMEM246Q9BRR3 403 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 PRR14Q9BWN1 585 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 ACTR10Q9NZ32 417 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 MGAT4BQ9UQ53 548 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 ENTPD4Q9Y227 616 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 COL6A3P12111 3177 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 CEP192Q8TEP8 1941 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 B4DGG1 531 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 LOC110117498-PIK3R3F6TDL0 507 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 PRKCAP17252 672 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 CD38P28907 300 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 MC3RP41968 323 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 TEKQ02763 1124 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 PODNL1Q6PEZ8 512 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 ASCC1Q8N9N2 400 aaKnown RBP13□□□□□ -0.33
PTCHD3-201ENST00000438700 FAM174AQ8TBP5 190 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 FNDC11Q9BVV2 318 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 OR2B2Q9GZK3 357 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 TWSG1Q9GZX9 223 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 ANKHQ9HCJ1 492 aa13□□□□□ -0.33
PTCHD3-201ENST00000438700 PAQR5Q9NXK6 330 aaPredicted RBP13□□□□□ -0.33
PTCHD3-201ENST00000438700 EFCAB10A6NFE3 127 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 OR5K4A6NMS3 321 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 FRS3O43559 492 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 MPZL2O60487 215 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 DCNP07585 359 aaKnown RBP12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 SLC15A1P46059 708 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 BTN3A2P78410 334 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 LTB4RQ15722 352 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 SPANXN2Q5MJ10 180 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 MRM1Q6IN84 353 aaKnown RBP12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 GJD3Q8N144 294 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 CADM4Q8NFZ8 388 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 ZDHHC1Q8WTX9 485 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 ZFPM2Q8WW38 1151 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 KAT2AQ92830 837 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 CLDN23Q96B33 292 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 MMP28Q9H239 520 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 ACAD8Q9UKU7 415 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 SLC9A8Q9Y2E8 581 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 EML5Q05BV3 1969 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 A0A1W2PR77 199 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 SH3D21A4FU49 640 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 FAM172BPA6NC97 362 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 SCO2O43819 266 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 APOA1P02647 267 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 CKMT1AP12532 417 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 LIMK1P53667 647 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 RPS15AP62244 130 aaKnown RBP12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 ILKQ13418 452 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 TAB1Q15750 504 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 BAK1Q16611 211 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 TSTQ16762 297 aaKnown RBP12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 ZFP69Q49AA0 526 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 SLX4IPQ5VYV7 408 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 PLAG1Q6DJT9 500 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 LYPD8Q6UX82 237 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 CASP12Q6UXS9 341 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 VN1R4Q7Z5H5 301 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 C11orf74Q86VG3 221 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 IQCHQ86VS3 1027 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 GALNT12Q8IXK2 581 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 TCEANCQ8N8B7 351 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 ZG16BQ96DA0 208 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 HSPA12BQ96MM6 686 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 TRNT1Q96Q11 434 aaKnown RBP12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 FYTTD1Q96QD9 318 aaKnown RBP12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 MGLLQ99685 303 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 ZSCAN32Q9NX65 697 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 SPAG17Q6Q759 2223 aa12.99□□□□□ -0.33
PTCHD3-201ENST00000438700 RGS5O15539 181 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 MMP11P24347 488 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 TNFSF8P32971 234 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 RFX2P48378 723 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 SLC48A1Q6P1K1 146 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 UBE2J2Q8N2K1 259 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 DEPDC7Q96QD5 511 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 MAN2C1Q9NTJ4 1040 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 TVP23BQ9NYZ1 205 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CLEC2DQ9UHP7 191 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CTSVO60911 334 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 NTN1O95631 604 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 FHP07954 510 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CSNK2A2P19784 350 aaPredicted RBP12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 HHEXQ03014 270 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 GPR50Q13585 617 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 TBRG1Q3YBR2 411 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 FCRL6Q6DN72 434 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 FBXO42Q6P3S6 717 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 FIGLAQ6QHK4 219 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms