RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 GOLGA8RI6L899 631 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 MSTNO14793 375 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 SMNDC1O75940 238 aaKnown RBP eCLIP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 SUPT7LO94864 414 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 PLAUP00749 431 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 IGHV4-39P01824 125 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 GSTA1P08263 222 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 RHOXF2BP0C7M4 288 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 PYGBP11216 843 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 CYP4B1P13584 511 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 PORP16435 677 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 SERPINB3P29508 390 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 CCKARP32238 428 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 UGT2B10P36537 528 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 PTGDSP41222 190 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 SLCO1A2P46721 670 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 FOXA1P55317 472 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 FBXW4P57775 412 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 TRA2BP62995 288 aaKnown RBP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 CSTF3Q12996 717 aaKnown RBP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 LCP2Q13094 533 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 GAB1Q13480 694 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 RASA2Q15283 850 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 RPS6KA2Q15349 733 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 SGO1Q5FBB7 561 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 PRR31Q5SQ13 230 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 FAM120AOSQ5T036 256 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 LGSNQ5TDP6 509 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 BICRALQ6AI39 1079 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 TTC19Q6DKK2 380 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 VASNQ6EMK4 673 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 TMEM81Q6P7N7 255 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 FAM111BQ6SJ93 734 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 GCNT2Q8N0V5 402 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.39□□□□□ -0.918e-8■■■■■ 32.7
CPNE1-214ENST00000435747 SPPL2AQ8TCT8 520 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 WDYHV1Q96HA8 205 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 KCNA7Q96RP8 456 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 RHOXF2Q9BQY4 288 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 NXF5Q9H1B4 397 aaKnown RBP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 BARX1Q9HBU1 254 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 TNFRSF12AQ9NP84 129 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 PSMC3IPQ9P2W1 217 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-214ENST00000435747 VPS29Q9UBQ0 182 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 MCM8Q9UJA3 840 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 SLC6A5Q9Y345 797 aa9.39□□□□□ -0.91
CPNE1-214ENST00000435747 A0A096LNT2 108 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 C16orf97H3BN30 126 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 LRATO95237 230 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ESRRBO95718 433 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 PROCP04070 461 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 SHBGP04278 402 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ABCB1P08183 1280 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-214ENST00000435747 POU2F1P14859 743 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ABCD3P28288 659 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ARL1P40616 181 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-214ENST00000435747 CASP3P42574 277 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 EMDP50402 254 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 LOXL1Q08397 574 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-214ENST00000435747 PRSS53Q2L4Q9 553 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 TRMT12Q53H54 448 aaKnown RBP9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ZNF628Q5EBL2 1059 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 FAM180BQ6P0A1 224 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 GPRIN3Q6ZVF9 776 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 TDRPQ86YL5 185 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 GBP7Q8N8V2 638 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-214ENST00000435747 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ZPLD1Q8TCW7 415 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ZNF675Q8TD23 568 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 RNF138Q8WVD3 245 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 AKAP1Q92667 903 aaKnown RBP eCLIP9.38□□□□□ -0.91
CPNE1-214ENST00000435747 HGDQ93099 445 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 APIPQ96GX9 242 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 ITPAQ9BY32 194 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 UGT2B28Q9BY64 529 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 CCL27Q9Y4X3 112 aa9.38□□□□□ -0.91
CPNE1-214ENST00000435747 FAM234BA2RU67 622 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 GOLGA6L10A6NI86 522 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 B4DXG7 233 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 TO15178 435 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 GUCY1B2O75343 617 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 ULK1O75385 1050 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 KRT6AP02538 564 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 KRT6BP04259 564 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 HPNP05981 417 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 ENO1P06733 434 aaKnown RBP9.37□□□□□ -0.91
CPNE1-214ENST00000435747 NAGAP17050 411 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 CSNK2A2P19784 350 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-214ENST00000435747 TAC1P20366 129 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 NT5EP21589 574 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 FEN1P39748 380 aaKnown RBP9.37□□□□□ -0.91
CPNE1-214ENST00000435747 KCNJ5P48544 419 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 KRT6CP48668 564 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 COMPP49747 757 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-214ENST00000435747 PKNOX1P55347 436 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 ACTG1P63261 375 aa9.37□□□□□ -0.91
CPNE1-214ENST00000435747 MRPS35P82673 323 aaKnown RBP9.37□□□□□ -0.91
CPNE1-214ENST00000435747 HMGCS1Q01581 520 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms