RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MGLLQ99685 303 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC29A1Q99808 456 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PDE7BQ9NP56 450 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DDX28Q9NUL7 540 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TRPC4Q9UBN4 977 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PLCL2Q9UPR0 1127 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CAMK2AQ9UQM7 478 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CSPG4Q6UVK1 2322 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SMLR1H3BR10 107 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FFAR3O14843 346 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GPR42O15529 346 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ERI3O43414 337 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC43A1O75387 559 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TNFRSF21O75509 655 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC2A2P11168 524 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ENGP17813 658 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GJA8P48165 433 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GIPRP48546 466 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GP2P55259 537 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 LMAN2Q12907 356 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PLK5Q496M5 336 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TXNDC8Q6A555 127 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DNAJC14Q6Y2X3 702 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF517Q6ZMY9 492 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 USP53Q70EK8 1073 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 VANGL1Q8TAA9 524 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MAPK15Q8TD08 544 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 LGALS12Q96DT0 336 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SIPA1Q96FS4 1042 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 KLHL5Q96PQ7 755 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GPX7Q96SL4 187 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SSX3Q99909 188 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RAB33BQ9H082 229 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RNF150Q9ULK6 438 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DOCK7Q96N67 2140 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TBC1D3DA0A087WVF3 549 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TBC1D3IA0A087WXS9 549 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 BTBD17A6NE02 478 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TBC1D3LB9A6J9 549 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MCIDASD6RGH6 385 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 OR2T7P0C7T2 308 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TBC1D3HP0C7X1 549 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CSNK1EP49674 416 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ADAM8P78325 824 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PTSQ03393 145 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 Q499Y3 187 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CCSMST1Q4G0I0 132 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ELFN2Q5R3F8 820 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PRAMEF19Q5SWL8 479 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TBC1D3CQ6IPX1 549 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DEF8Q6ZN54 512 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MRGPREQ86SM8 312 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TBC1D3Q8IZP1 549 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 OR2T27Q8NH04 317 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FANK1Q8TC84 345 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TCEAL7Q9BRU2 100 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC17A9Q9BYT1 436 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 IL1RL2Q9HB29 575 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 EMC7Q9NPA0 242 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 IL20Q9NYY1 176 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 KCNN3Q9UGI6 736 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TRAV1-2A0A0B4J238 106 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FAM240BA0A1B0GVZ2 78 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 A0A1W2PRG6 482 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CDC7O00311 574 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GPR171O14626 319 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SCAMP3O14828 347 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 WDPCPO95876 746 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 IGLV3-19P01714 112 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CD36P16671 472 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 M6PRP20645 277 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CCR10P46092 362 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 LASP1Q14847 261 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ELAVL1Q15717 326 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF77Q15935 545 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DPY19L2P2Q6ZN68 376 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 EPHX4Q8IUS5 362 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GPIHBP1Q8IV16 184 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 UBQLNLQ8IYU4 475 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ASCC1Q8N9N2 400 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM145Q8NBT3 493 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 LRTOMTQ8WZ04 291 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC25A46Q96AG3 418 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZC3HAV1LQ96H79 300 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MCOLN1Q9GZU1 580 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RBM38Q9H0Z9 239 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SMDT1Q9H4I9 107 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NKX1-2Q9UD57 310 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 WDR45Q9Y484 360 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 OR51B4Q9Y5P0 310 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 KIAA1549LQ6ZVL6 1849 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DAPL1A0PJW8 107 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MTRF1O75570 445 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC25A12O75746 678 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GBAP04062 536 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RHOP08100 348 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GKN3PP0CG01 181 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CREB1P16220 341 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DAP3P51398 398 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms