RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 A0A087WUU8 490 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 A0A0B4J293 547 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 SCO2O43819 266 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 HMGN2P05204 90 aaKnown RBP9.89□□□□□ -0.83
SMPD4-206ENST00000433118 CTHP32929 405 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 PPP2CBP62714 309 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 PPP2CAP67775 309 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 REEP5Q00765 189 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 SNAP47Q5SQN1 464 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 OR4C11Q6IEV9 310 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 CNIH2Q6PI25 160 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 PAMR1Q6UXH9 720 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 SIMC1Q8NDZ2 872 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 SUN3Q8TAQ9 357 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 RNF31Q96EP0 1072 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 FAM46AQ96IP4 442 aaKnown RBP9.89□□□□□ -0.83
SMPD4-206ENST00000433118 GDF15Q99988 308 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 HDHD5Q9BXW7 423 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 ZNF576Q9H609 170 aa9.89□□□□□ -0.83
SMPD4-206ENST00000433118 SF3B6Q9Y3B4 125 aaKnown RBP9.89□□□□□ -0.83
SMPD4-206ENST00000433118 OR6C70A6NIJ9 312 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 CPSF4LA6NMK7 179 aaKnown RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 LCMT2O60294 686 aaKnown RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 HPGDSO60760 199 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 NCR1O76036 304 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 UBXN7O94888 489 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 MAP2K3P46734 347 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 INPP1P49441 399 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 MAN2A2P49641 1150 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 CDH11P55287 796 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 PPP3R1P63098 170 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 MINDY4Q4G0A6 757 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ZNF628Q5EBL2 1059 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ZNF776Q68DI1 518 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ZNF438Q7Z4V0 828 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 UBE3DQ7Z6J8 389 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 GLCCI1Q86VQ1 547 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 OR8D4Q8NGM9 314 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 KIAA1143Q96AT1 154 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 C12orf66Q96MD2 445 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 MACROD1Q9BQ69 325 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 FGF20Q9NP95 211 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 EQTNQ9NQ60 294 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 EXOSC1Q9Y3B2 195 aaKnown RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 POM121BA6NF01 834 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 NTN1O95631 604 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ALPPP05187 535 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 LIMS3P0CW19 117 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 LIMS4P0CW20 117 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 C8orf89P0DMQ9 161 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 CELP19835 753 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 C5AR1P21730 350 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 NTSR1P30989 418 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ATP6V1E1P36543 226 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 IFNGR2P38484 337 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 MLLT3P42568 568 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ANXA11P50995 505 aaKnown RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 GAS1P54826 345 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 EFNB1P98172 346 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 GNA13Q14344 377 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ARHGAP19Q14CB8 494 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 TATDN3Q17R31 274 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ZNF750Q32MQ0 723 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 PRICKLE2Q7Z3G6 844 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 CCDC116Q8IYX3 515 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 OR4F15Q8NGB8 312 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 RAB7BQ96AH8 199 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 COX14Q96I36 57 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 RIPOR3Q96MK2 946 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 FERD3LQ96RJ6 166 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 ARHGAP9Q9BRR9 750 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 FAIM2Q9BWQ8 316 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 PCBD2Q9H0N5 130 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 RPRD1BQ9NQG5 326 aaKnown RBP9.88□□□□□ -0.83
SMPD4-206ENST00000433118 PIAS3Q9Y6X2 628 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 COL4A3Q01955 1670 aa9.88□□□□□ -0.83
SMPD4-206ENST00000433118 FAM25AB3EWG3 89 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 FAM25CB3EWG5 89 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 FAM25GB3EWG6 89 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 RNGTTO60942 597 aaKnown RBP9.87□□□□□ -0.83
SMPD4-206ENST00000433118 SLC35G4P0C7Q5 338 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 FUT5Q11128 374 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 RPA4Q13156 261 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 KRT33BQ14525 404 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 P2RY14Q15391 338 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 CCDC85BQ15834 202 aaPredicted RBP9.87□□□□□ -0.83
SMPD4-206ENST00000433118 ZNF311Q5JNZ3 666 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 SDE2Q6IQ49 451 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 KIAA1161Q6NSJ0 714 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 SLC30A6Q6NXT4 461 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 TMEM107Q6UX40 140 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 ABI3BPQ7Z7G0 1075 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 FGF11Q92914 225 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 OTULINQ96BN8 352 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 RNF170Q96K19 258 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 SLC17A9Q9BYT1 436 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 DDX31Q9H8H2 851 aaKnown RBP9.87□□□□□ -0.83
SMPD4-206ENST00000433118 CLCA3PQ9Y6N3 262 aa9.87□□□□□ -0.83
SMPD4-206ENST00000433118 LALBAP00709 142 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms