RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 ZNF639Q9UID6 485 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 PCDHGB6Q9Y5F9 930 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 TRBV5-3A0A0A0MS03 114 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 CLEC18AA5D8T8 446 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 GSC2O15499 205 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 NME2P1O60361 137 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 SEMA7AO75326 666 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 HMGN2P05204 90 aaKnown RBP13.15□□□□□ -0.3
LAMA4-208ENST00000431543 ALOX5P09917 674 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 NME2P22392 152 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 PTPN6P29350 595 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 KHKP50053 298 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 TDGF1P3P51864 188 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 SLC7A2P52569 658 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 EEFSECP57772 596 aaKnown RBP13.15□□□□□ -0.3
LAMA4-208ENST00000431543 MTPNP58546 118 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 DCAF7P61962 342 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 PSPHP78330 225 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 GAB1Q13480 694 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 LASP1Q14847 261 aaKnown RBP13.15□□□□□ -0.3
LAMA4-208ENST00000431543 RGNQ15493 299 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 INAQ16352 499 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 GTDC1Q4AE62 458 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 PIGGQ5H8A4 983 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 RNFT1Q5M7Z0 435 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 ATAD3BQ5T9A4 648 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 C8orf82Q6P1X6 216 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-208ENST00000431543 CLEC18BQ6UXF7 455 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 SERPINA11Q86U17 422 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 RNF130Q86XS8 419 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 SULF2Q8IWU5 870 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 CLEC4FQ8N1N0 589 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 ZNF615Q8N8J6 731 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 CLEC18CQ8NCF0 446 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 ASB15Q8WXK1 588 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 NR4A3Q92570 626 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 JADE3Q92613 823 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 RAB3IPQ96QF0 476 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-208ENST00000431543 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-208ENST00000431543 SLC39A3Q9BRY0 314 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 TSPAN10Q9H1Z9 355 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-208ENST00000431543 EQTNQ9NQ60 294 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 SLC6A13Q9NSD5 602 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 EXD2Q9NVH0 621 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 TMEM181Q9P2C4 612 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 ERVK-11Q9UQG0 969 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
LAMA4-208ENST00000431543 SVILO95425 2214 aa13.15□□□□□ -0.31
LAMA4-208ENST00000431543 C2orf92A0A1B0GVN3 265 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 A8MVJ9 347 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 FXYD1O00168 92 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 CDK2AP1O14519 115 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 ASNA1O43681 348 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 NADKO95544 446 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 CBX7O95931 251 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 GPX2P18283 190 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 RFC3P40938 356 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 GPR85P60893 370 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 NCALDP61601 193 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 LIPEQ05469 1076 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 ZNF155Q12901 538 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 DUSP8Q13202 625 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 EXOSC7Q15024 291 aaKnown RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 RABL3Q5HYI8 236 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 FHL5Q5TD97 284 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 MFSD12Q6NUT3 480 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 ERICH5Q6P6B1 374 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 LYPD8Q6UX82 237 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 SLC30A8Q8IWU4 369 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 MSRB3Q8IXL7 192 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 SLC15A3Q8IY34 581 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 TMEM178AQ8NBL3 297 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 FBXO27Q8NI29 283 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 NUBPLQ8TB37 319 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 PNPT1Q8TCS8 783 aaKnown RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 SLC9A6Q92581 669 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 TMEM125Q96AQ2 219 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 AURKBQ96GD4 344 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 FRMD6Q96NE9 622 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 GAL3ST4Q96RP7 486 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 WWTR1Q9GZV5 400 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 ANKRA2Q9H9E1 313 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 DEPPQ9NTK1 212 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 HPF1Q9NWY4 346 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 GIN1Q9NXP7 522 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 MRTO4Q9UKD2 239 aaKnown RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 DTX4Q9Y2E6 619 aa13.14□□□□□ -0.31
LAMA4-208ENST00000431543 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 USP9XQ93008 2570 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-208ENST00000431543 A0A0G2JMM0 328 aa13.13□□□□□ -0.31
LAMA4-208ENST00000431543 A0A1W2PPB8 328 aa13.13□□□□□ -0.31
LAMA4-208ENST00000431543 A0A1W2PRS3 328 aa13.13□□□□□ -0.31
LAMA4-208ENST00000431543 PINLYPA6NC86 204 aa13.13□□□□□ -0.31
LAMA4-208ENST00000431543 KIR3DP1A8MWS1 328 aa13.13□□□□□ -0.31
LAMA4-208ENST00000431543 C5orf58C9J3I9 102 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms