RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 FKBP9P1Q75LS8 142 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 ARMC8Q8IUR7 673 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 LRTOMTQ8WZ04 291 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 PIK3R3Q92569 461 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 PMM1Q92871 262 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 TPD52L3Q96J77 140 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 COL21A1Q96P44 957 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 BTBD9Q96Q07 612 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 NUDT9Q9BW91 350 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 ITPAQ9BY32 194 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 FAM117AQ9C073 453 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 ZNF350Q9GZX5 532 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 Q9N2J8 555 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 PADI2Q9Y2J8 665 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 PTRH2Q9Y3E5 179 aaKnown RBP16.9■□□□□ 0.3
HMGN1-206ENST00000431390 SETXQ7Z333 2677 aaKnown RBP16.9■□□□□ 0.3
HMGN1-206ENST00000431390 PTPRQQ9UMZ3 2332 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 LOC102723996A0A087X1L8 192 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 CASQ2O14958 399 aaPredicted RBP16.89■□□□□ 0.3
HMGN1-206ENST00000431390 STX11O75558 287 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 IGHEP01854 428 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 CT45A8P0DMV1 189 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 CT45A9P0DMV2 189 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 GPR143P51810 404 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 DCAF7P61962 342 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 KCNJ10P78508 379 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 CHRNEQ04844 493 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 CT45A2Q5DJT8 189 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 FRRS1Q6ZNA5 592 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 VTCN1Q7Z7D3 282 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 ZNF321PQ8N8H1 164 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 TMEM102Q8N9M5 508 aaPredicted RBP16.89■□□□□ 0.3
HMGN1-206ENST00000431390 B3GNT7Q8NFL0 401 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 LPAR4Q99677 370 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 SEMA4CQ9C0C4 833 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 SAP130Q9H0E3 1048 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 POLR1BQ9H9Y6 1135 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 IL1RAPQ9NPH3 570 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 AGPAT4Q9NRZ5 378 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 SEC14L3Q9UDX4 400 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 BAG5Q9UL15 447 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 GPR55Q9Y2T6 319 aaPredicted RBP16.89■□□□□ 0.3
HMGN1-206ENST00000431390 WDR45Q9Y484 360 aa16.89■□□□□ 0.3
HMGN1-206ENST00000431390 HELZ2Q9BYK8 2649 aaKnown RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 TPST1O60507 370 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 UMODP07911 640 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 CD247P20963 164 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 FOLR3P41439 243 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 PPICP45877 212 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 PTDSS1P48651 473 aaKnown RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 IFI44LQ53G44 452 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 TYW3Q6IPR3 259 aaKnown RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 PAPD4Q6PIY7 484 aaKnown RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 NPSR1Q6W5P4 371 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 NFAM1Q8NET5 270 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 OR10Q1Q8NGQ4 319 aa16.89■□□□□ 0.29
HMGN1-206ENST00000431390 WDR77Q9BQA1 342 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 TRIM45Q9H8W5 580 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 MTHFD2LQ9H903 347 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-206ENST00000431390 IGHV3-20A0A0C4DH32 117 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 GXYLT2A0PJZ3 443 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 KCNK2O95069 426 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 ALPPP05187 535 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 TCN2P20062 427 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 KCNJ5P48544 419 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 EBPQ15125 230 aaKnown RBP16.88■□□□□ 0.29
HMGN1-206ENST00000431390 ATP6AP1Q15904 470 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 HMBOX1Q6NT76 420 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 SLC29A4Q7RTT9 530 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 PIWIL3Q7Z3Z3 882 aaKnown RBP16.88■□□□□ 0.29
HMGN1-206ENST00000431390 ZDHHC21Q8IVQ6 265 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 NLGN4XQ8N0W4 816 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 ZNF619Q8N2I2 560 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 SMYD1Q8NB12 490 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 NLGN4YQ8NFZ3 816 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-206ENST00000431390 CT55Q8WUE5 264 aa16.88■□□□□ 0.29
HMGN1-206ENST00000431390 GEMIN6Q8WXD5 167 aaKnown RBP16.88■□□□□ 0.29
HMGN1-206ENST00000431390 RMND5BQ96G75 393 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-206ENST00000431390 FRG2CA6NGY1 282 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 RRP8O43159 456 aaKnown RBP16.87■□□□□ 0.29
HMGN1-206ENST00000431390 KIAA0513O60268 411 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 FCMRO60667 390 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 DEAF1O75398 565 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-206ENST00000431390 LDLRP01130 860 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 FABP3P05413 133 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 PABPC4LP0CB38 370 aaKnown RBP16.87■□□□□ 0.29
HMGN1-206ENST00000431390 DRD5P21918 477 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 CD82P27701 267 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 PIGAP37287 484 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 GABREP78334 506 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 RTP5Q14D33 572 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 TRIP10Q15642 601 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 DUSP7Q16829 419 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 CYP27C1Q4G0S4 372 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 CCNJQ5T5M9 372 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 OLIG3Q7RTU3 272 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 C9orf40Q8IXQ3 194 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 C17orf47Q8NEP4 570 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 SPPL2AQ8TCT8 520 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 ADIPOR1Q96A54 375 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms