RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR52N2Q8NGI0 321 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 MED28Q9H204 178 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 POMT2Q9UKY4 750 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 CHP2O43745 196 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 ASB18Q6ZVZ8 466 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 OR14L1PQ8NHC6 308 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.46
PTCH1-207ENST00000429896 MAN2B2Q9Y2E5 1009 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 CCNKO75909 580 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF28P17035 718 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 DLSTP36957 453 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 OR5K1Q8NHB7 308 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 SMURF1Q9HCE7 757 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 PRDM9Q9NQV7 894 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 A0A0G2JPF8 293 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 HNRNPCL3B7ZW38 293 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 SLC30A4O14863 429 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 PROM1O43490 865 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 HNRNPCL4P0DMR1 293 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 NR2C1P13056 603 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 DCAF7P61962 342 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 PRR22Q8IZ63 422 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 GALNT11Q8NCW6 608 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 SFXN5Q8TD22 340 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 HAVCR1Q96D42 359 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 COX14Q96I36 57 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 BARD1Q99728 777 aaKnown RBP12.15□□□□□ -0.46
PTCH1-207ENST00000429896 TRIM2Q9C040 744 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 A0A1B0GTQ1 180 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF878C9JN71 531 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 PSKH1P11801 424 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 CD1CP29017 333 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 OR12D2P58182 307 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 EIF3IQ13347 325 aaKnown RBP12.15□□□□□ -0.47
PTCH1-207ENST00000429896 VMACQ2NL98 169 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 UGT3A2Q3SY77 523 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 LCN1P1Q5VSP4 162 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 DHRS13Q6UX07 377 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 SLC6A16Q9GZN6 736 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 TMEM165Q9HC07 324 aa12.15□□□□□ -0.47
PTCH1-207ENST00000429896 GABRR3A8MPY1 467 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 UQCRC1P31930 480 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 GRK5P34947 590 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 PRKCDQ05655 676 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 RCAN2Q14206 197 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 COQ5Q5HYK3 327 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 OPN5Q6U736 354 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 NLGN4XQ8N0W4 816 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 OR8H3Q8N146 312 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 ALOX12BO75342 701 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 CD46P15529 392 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 GSTM3P21266 225 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 AQP4P55087 323 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 SLC3A1Q07837 685 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 NKAIN1Q4KMZ8 207 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 THEM6Q8WUY1 208 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 SP140LQ9H930 580 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 LRRC42Q9Y546 428 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 EDNRAP25101 427 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 EXOSC7Q15024 291 aaKnown RBP12.14□□□□□ -0.47
PTCH1-207ENST00000429896 ABHD17CQ6PCB6 329 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 PIK3R3Q92569 461 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 MTHFD2LQ9H903 347 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-207ENST00000429896 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
PTCH1-207ENST00000429896 IGLV3-16A0A075B6K0 115 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 DAPL1A0PJW8 107 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 LSM1O15116 133 aaKnown RBP12.14□□□□□ -0.47
PTCH1-207ENST00000429896 EFEMP2O95967 443 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 DHFRP00374 187 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 ZFP69Q49AA0 526 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 CYHR1Q6ZMK1 362 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 ASRGL1Q7L266 308 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 OR10G2Q8NGC3 310 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 ATP13A2Q9NQ11 1180 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 PFDN2Q9UHV9 154 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 GABREP78334 506 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 CARD17Q5XLA6 110 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 ACTR3BQ9P1U1 418 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 FARSAQ9Y285 508 aaKnown RBP12.14□□□□□ -0.47
PTCH1-207ENST00000429896 PLEKHA6Q9Y2H5 1048 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 PCDHA9Q9Y5H5 950 aa12.14□□□□□ -0.47
PTCH1-207ENST00000429896 PATE3B3GLJ2 98 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 KCNK5O95279 499 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 BMP8AQ7Z5Y6 402 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 POLR2J3Q9H1A7 115 aaKnown RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 SEMA4GQ9NTN9 838 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 MKLN1Q9UL63 735 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 DLL1O00548 723 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 IGHV4-34P06331 123 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 ANXA8P13928 327 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 MAP3K8P41279 467 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 SLC35F3Q8IY50 421 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 DTX3Q8N9I9 347 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 PROKR1Q8TCW9 393 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 DNAJA4Q8WW22 397 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 FKBP10Q96AY3 582 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms