RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 NSUN5Q96P11 429 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 PINK1Q9BXM7 581 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TLNRD1Q9H1K6 362 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 PARPBPQ9NWS1 579 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 EVPLQ92817 2033 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CXorf65A6NEN9 183 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 EEF1E1O43324 174 aaKnown RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 GUCA1CO95843 209 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 C6orf47O95873 294 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 F2P00734 622 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 SERPINA5P05154 406 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CD2P06729 351 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 MTHFD2P13995 350 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 GABRA5P31644 462 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 VIPR1P32241 457 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 IRS1P35568 1242 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CAV3P56539 151 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 SNRPGP62308 76 aaKnown RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 DYRK1AQ13627 763 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 PAFAH1B3Q15102 231 aaKnown RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CRTC2Q53ET0 693 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 LRIF1Q5T3J3 769 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 Q6ZSR9 355 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CBLL1Q75N03 491 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 KLHDC8BQ8IXV7 354 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 LAS2Q8IYD9 372 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 HDDC3Q8N4P3 179 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 SYT14Q8NB59 555 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 PNPLA2Q96AD5 504 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 TAAR9Q96RI9 348 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 FAM117AQ9C073 453 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CHST5Q9GZS9 411 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 NANSQ9NR45 359 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 RBM22Q9NW64 420 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 TEX10Q9NXF1 929 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 GOLT1BQ9Y3E0 138 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 PRKAB1Q9Y478 270 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 IGKV6-21A0A0C4DH24 114 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 ABHD14A-ACY1A0A1B0GW23 586 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A1W2PRB8 838 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 M0QYT0 321 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR1I1O60431 355 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 SPDEFO95238 335 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 MLYCDO95822 493 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 HOXB5P09067 269 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR4E1P0C645 316 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 GKN3PP0CG01 181 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CLUP10909 449 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 ELNP15502 786 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 GOT1P17174 413 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 HOXA5P20719 270 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CERS1P27544 350 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CLDN8P56748 225 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 ITKQ08881 620 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 GAB1Q13480 694 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 LY6KQ17RY6 165 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 ALG11Q2TAA5 492 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 COL13A1Q5TAT6 717 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 HECTD2Q5U5R9 776 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 Q6ZTK2 550 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CFAP206Q8IYR0 622 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 PHACTR4Q8IZ21 702 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 TRAM1L1Q8N609 369 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC5A8Q8N695 610 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 NKAIN3Q8N8D7 197 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR5T3Q8NGG3 340 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 C3orf49Q96BT1 292 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 ARMC5Q96C12 935 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 MALSU1Q96EH3 234 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 TEAD3Q99594 435 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 C1QTNF3Q9BXJ4 246 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 SPATC1LQ9H0A9 340 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 C20orf85Q9H1P6 137 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 BCO1Q9HAY6 547 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 GLRX2Q9NS18 164 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 CBLCQ9ULV8 474 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 RPL36Q9Y3U8 105 aaKnown RBP8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 SNX11Q9Y5W9 270 aa8.35□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR2W5A6NFC9 320 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZAR1LA6NP61 321 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 LILRB3O75022 631 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 IGF2P01344 180 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 IQCF3P0C7M6 154 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 CD1DP15813 335 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 S100A2P29034 98 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 CDX1P47902 265 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SULT1E1P49888 294 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PSMA6P60900 246 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 RAP1AP62834 184 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TLE2Q04725 743 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PPIGQ13427 754 aaKnown RBP eCLIP8.34□□□□□ -1.072e-7■■■□□ 16.3
CDC42BPA-206ENST00000429440 ARHGEF7Q14155 803 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TRAM1Q15629 374 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TOMM34Q15785 309 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 AFMIDQ63HM1 303 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms