RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 NTHL1P78549 312 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 EIF2B1Q14232 305 aaKnown RBP8.48□□□□□ -1.05
CTNND1-208ENST00000428599 SMIM15Q7Z3B0 74 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 GPR149Q86SP6 731 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 VRK1Q99986 396 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-208ENST00000428599 OR10A5Q9H207 317 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 OR10A2Q9H208 303 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 CHRDQ9H2X0 955 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 GCM1Q9NP62 436 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 LRFN1Q9P244 771 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 MYH7P12883 1935 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 PRKYO43930 277 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 SERPINE2P07093 398 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 IL1RNP18510 177 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 AGTR2P50052 363 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 ZNF136P52737 540 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 CTXN1P60606 82 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 PHC2Q8IXK0 858 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 KLHDC8AQ8IYD2 350 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 ZNF808Q8N4W9 903 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-208ENST00000428599 OR51D1Q8NGF3 324 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 ECHDC3Q96DC8 303 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 OR14A2Q96R54 314 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 MTHFD2LQ9H903 347 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-208ENST00000428599 SLX4Q8IY92 1834 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 A6NHS1 94 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 ZNF487B1APH4 448 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 SULT2B1O00204 365 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 CRTAPO75718 401 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-208ENST00000428599 TPPPO94811 219 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 CD34P28906 385 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 DEFB133Q30KQ1 61 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 NIPAL3Q6P499 406 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 OR5AK2Q8NH90 309 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 RDH12Q96NR8 316 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 SAGE1Q9NXZ1 904 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 TAS2R8Q9NYW2 309 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 GNG13Q9P2W3 67 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 UBQLN2Q9UHD9 624 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 TEX264Q9Y6I9 313 aa8.48□□□□□ -1.05
CTNND1-208ENST00000428599 H2AFB2P0C5Z0 115 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 GNB3P16520 340 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ALDH3B2P48448 385 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 CX3CR1P49238 355 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ZNF169Q14929 603 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 GRIN2CQ14957 1233 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 RABL3Q5HYI8 236 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 MANEALQ5VSG8 457 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 LIPKQ5VXJ0 399 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 OR4K15Q8NH41 348 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 NAT6Q93015 286 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 UCN3Q969E3 161 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 LIN37Q96GY3 246 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ZIC5Q96T25 663 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 OBP2BQ9NPH6 170 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 CD93Q9NPY3 652 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ERVK-19Q9WJR5 959 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 MYH8P13535 1937 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 EEF1E1-BLOC1S5C9J1V9 151 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 FOXE1O00358 373 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 SSX4O60224 188 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 UBL4AP11441 157 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 SIM1P81133 766 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 HTD2P86397 168 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 UMODL1-AS1Q8N2C9 162 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ZNF619Q8N2I2 560 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ZUFSPQ96AP4 578 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 SENP5Q96HI0 755 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ALOXE3Q9BYJ1 711 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 BOKQ9UMX3 212 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 A0A0J9YY10 115 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 MEGF11A6BM72 1044 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 CD300LBA8K4G0 201 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 C17orf105B2RV13 164 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 IL1AP01583 271 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 SERPINA5P05154 406 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 RPS3P23396 243 aaKnown RBP eCLIP8.47□□□□□ -1.057e-7■■■□□ 16.1
CTNND1-208ENST00000428599 HTR3AP46098 478 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 PRKXP51817 358 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 RRADP55042 308 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 STEAP3Q658P3 488 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ZNF704Q6ZNC4 412 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 LRRTM3Q86VH5 581 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 ZNF784Q8NCA9 323 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 OR8J1Q8NGP2 316 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 RNF128Q8TEB7 428 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 PFDN5Q99471 154 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 TXN2Q99757 166 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 TSPAN10Q9H1Z9 355 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 PDE4DIPQ5VU43 2346 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 PCDH17O14917 1159 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 SCAMP2O15127 329 aaKnown RBP8.47□□□□□ -1.05
CTNND1-208ENST00000428599 LILRB3O75022 631 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 FOSL1P15407 271 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 MSR1P21757 451 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 CSNK1A1P48729 337 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 TAS2R20P59543 309 aa8.47□□□□□ -1.05
CTNND1-208ENST00000428599 FXYD4P59646 89 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms