RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 PUM1Q14671 1186 aaKnown RBP eCLIP14.01□□□□□ -0.17
GINS3-203ENST00000426538 NRF1Q16656 503 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 FLYWCH1Q4VC44 716 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 PPP4R4Q6NUP7 873 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 TMEM205Q6UW68 189 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 FAM198BQ6UWH4 519 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 VRK2Q86Y07 508 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 SVOPLQ8N434 492 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 B3GNT7Q8NFL0 401 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 OR4N2Q8NGD1 307 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 LCORQ96JN0 433 aaPredicted RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 BTBD9Q96Q07 612 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 ZNF300Q96RE9 604 aaPredicted RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 AMBRA1Q9C0C7 1298 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 SAP130Q9H0E3 1048 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 REEP1Q9H902 201 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 C8orf4Q9NR00 106 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 NDUFAF4Q9P032 175 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 GPR55Q9Y2T6 319 aaPredicted RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 LRRC42Q9Y546 428 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 U3KQV3 271 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 MUC6Q6W4X9 2439 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 WDFY3Q8IZQ1 3526 aa14□□□□□ -0.17
GINS3-203ENST00000426538 PMS2P1A4D2B8 440 aa14□□□□□ -0.17
GINS3-203ENST00000426538 SAGE2PA6NJ88 616 aa14□□□□□ -0.17
GINS3-203ENST00000426538 C9orf172C9J069 976 aa14□□□□□ -0.17
GINS3-203ENST00000426538 PDLIM1O00151 329 aa14□□□□□ -0.17
GINS3-203ENST00000426538 ADAMDEC1O15204 470 aa14□□□□□ -0.17
GINS3-203ENST00000426538 DKK1O94907 266 aa14□□□□□ -0.17
GINS3-203ENST00000426538 ZIC2O95409 532 aaPredicted RBP14□□□□□ -0.17
GINS3-203ENST00000426538 LGI1O95970 557 aa14□□□□□ -0.17
GINS3-203ENST00000426538 DBIP07108 87 aaKnown RBP14□□□□□ -0.17
GINS3-203ENST00000426538 ZNF26P17031 533 aaPredicted RBP14□□□□□ -0.17
GINS3-203ENST00000426538 PRKAR1BP31321 381 aa14□□□□□ -0.17
GINS3-203ENST00000426538 TARDBPQ13148 414 aaKnown RBP eCLIP14□□□□□ -0.17
GINS3-203ENST00000426538 NNATQ16517 81 aa14□□□□□ -0.17
GINS3-203ENST00000426538 DECR1Q16698 335 aa14□□□□□ -0.17
GINS3-203ENST00000426538 PAPD4Q6PIY7 484 aaKnown RBP14□□□□□ -0.17
GINS3-203ENST00000426538 NPSR1Q6W5P4 371 aa14□□□□□ -0.17
GINS3-203ENST00000426538 ASCL5Q7RTU5 278 aa14□□□□□ -0.17
GINS3-203ENST00000426538 CARM1Q86X55 608 aa14□□□□□ -0.17
GINS3-203ENST00000426538 KBTBD2Q8IY47 623 aa14□□□□□ -0.17
GINS3-203ENST00000426538 CBR4Q8N4T8 237 aa14□□□□□ -0.17
GINS3-203ENST00000426538 OR5K1Q8NHB7 308 aa14□□□□□ -0.17
GINS3-203ENST00000426538 GAL3ST4Q96RP7 486 aa14□□□□□ -0.17
GINS3-203ENST00000426538 FBXO34Q9NWN3 711 aa14□□□□□ -0.17
GINS3-203ENST00000426538 MRTO4Q9UKD2 239 aaKnown RBP14□□□□□ -0.17
GINS3-203ENST00000426538 C15orf41Q9Y2V0 281 aa14□□□□□ -0.17
GINS3-203ENST00000426538 AGAP5A6NIR3 686 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 SYT5O00445 386 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 SOCS2O14508 198 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 DPM1O60762 260 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 GUSBP08236 651 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 CEACAM1P13688 526 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 RHCEP18577 417 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 TCN2P20062 427 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 DRD5P21918 477 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 YAP1P46937 504 aaKnown RBP13.99□□□□□ -0.17
GINS3-203ENST00000426538 PSMD4P55036 377 aaKnown RBP13.99□□□□□ -0.17
GINS3-203ENST00000426538 AQP4P55087 323 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 IQCCQ4KMZ1 466 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 OTUD3Q5T2D3 398 aaPredicted RBP13.99□□□□□ -0.17
GINS3-203ENST00000426538 STK32CQ86UX6 486 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 CYP4Z1Q86W10 505 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 TMPRSS12Q86WS5 348 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 PACRGLQ8N7B6 248 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 OR2Y1Q8NGV0 311 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 VANGL1Q8TAA9 524 aaPredicted RBP13.99□□□□□ -0.17
GINS3-203ENST00000426538 SLC29A1Q99808 456 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 ARMC7Q9H6L4 198 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 ZNF443Q9Y2A4 671 aaPredicted RBP13.99□□□□□ -0.17
GINS3-203ENST00000426538 SAMHD1Q9Y3Z3 626 aaKnown RBP13.99□□□□□ -0.17
GINS3-203ENST00000426538 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 ENPP4Q9Y6X5 453 aa13.99□□□□□ -0.17
GINS3-203ENST00000426538 A0A1W2PNU3 283 aaPredicted RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 PRAMEF25A6NGN4 478 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 PCDH17O14917 1159 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 ACOX3O15254 700 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 KIAA0513O60268 411 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 KLF7O75840 302 aaPredicted RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 TNFSF15O95150 251 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 DLGAP3O95886 979 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 THBS1P07996 1170 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 RRM2P31350 389 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 DNAJA1P31689 397 aaKnown RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 FOLR3P41439 243 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 GPR143P51810 404 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 IST1P53990 364 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 PPP1R8Q12972 351 aaKnown RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 EBPQ15125 230 aaKnown RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 TAF11Q15544 211 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 LIN52Q52LA3 116 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 EIPR1Q53HC9 387 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 AP1ARQ63HQ0 302 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 DHRS4L2Q6PKH6 230 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 HIPK1Q86Z02 1210 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 EPHX4Q8IUS5 362 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 C9orf40Q8IXQ3 194 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 CACTIN-AS1Q8N1I8 211 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 BCORP1Q8N888 145 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms