RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 INPP5JQ15735 1006 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-209ENST00000425836 CCNJQ5T5M9 372 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 TNFAIP8L2Q6P589 184 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-209ENST00000425836 FIGNL1Q6PIW4 674 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 GALNT10Q86SR1 603 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 MSRB3Q8IXL7 192 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 DPP10Q8N608 796 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 PNPT1Q8TCS8 783 aaKnown RBP22.46■■□□□ 1.19
VEGFA-209ENST00000425836 TMCO6Q96DC7 493 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 CCDC106Q9BWC9 280 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 MYLK2Q9H1R3 596 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 SLC25A37Q9NYZ2 338 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 NTNG1Q9Y2I2 539 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 ARL2BPQ9Y2Y0 163 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 PCDHGB3Q9Y5G1 929 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 PINLYPA6NC86 204 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 FBP2O00757 339 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 FAM107AO95990 144 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 OR12D1P0DN82 309 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 CASP3P42574 277 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 MVDP53602 400 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 PSMD4P55036 377 aaKnown RBP22.46■■□□□ 1.19
VEGFA-209ENST00000425836 COX20Q5RI15 118 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 DLEU7Q6UYE1 221 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 OR2M7Q8NG81 312 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 FBXO34Q9NWN3 711 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 SPTA1P02549 2419 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 LOC100653049A0A140TA62 436 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 KRT34O76011 436 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 DNASE1L1P49184 302 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 MAPRE2Q15555 327 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.45■■□□□ 1.18
VEGFA-209ENST00000425836 TMEM81Q6P7N7 255 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 ZAR1Q86SH2 424 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 SNX32Q86XE0 403 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 FAM98AQ8NCA5 519 aaKnown RBP22.45■■□□□ 1.18
VEGFA-209ENST00000425836 GRHL3Q8TE85 626 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 RAB8BQ92930 207 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 NTNG2Q96CW9 530 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 FRMD6Q96NE9 622 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 FAM173AQ9BQD7 235 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 ANGPTL4Q9BY76 406 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 FLRT3Q9NZU0 649 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 VAPAQ9P0L0 249 aa22.45■■□□□ 1.18
VEGFA-209ENST00000425836 NUP214P35658 2090 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-209ENST00000425836 TRBV5-3A0A0A0MS03 114 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 ASNA1O43681 348 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 UNC5CO95185 931 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 PTGDSP41222 190 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 KHKP50053 298 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 DCST2Q5T1A1 773 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 ZFP62Q8NB50 900 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-209ENST00000425836 DNAJB8Q8NHS0 232 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 XAGE5Q8WWM1 108 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 METTL7AQ9H8H3 244 aa22.44■■□□□ 1.18
VEGFA-209ENST00000425836 CLIC1O00299 241 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 HMGN4O00479 90 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 HS6ST1O60243 411 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 ICOSLGO75144 302 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 C19orf57Q0VDD7 668 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 FOXO1Q12778 655 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 CYLC2Q14093 348 aaPredicted RBP22.43■■□□□ 1.18
VEGFA-209ENST00000425836 TBCELQ5QJ74 424 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.43■■□□□ 1.181e-7■□□□□ 10.9
VEGFA-209ENST00000425836 PRICKLE2Q7Z3G6 844 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 CHDHQ8NE62 594 aaPredicted RBP22.43■■□□□ 1.18
VEGFA-209ENST00000425836 CPT1CQ8TCG5 803 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 RNF138Q8WVD3 245 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 BARD1Q99728 777 aaKnown RBP22.43■■□□□ 1.18
VEGFA-209ENST00000425836 DOHHQ9BU89 302 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 G6PC3Q9BUM1 346 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 EXD2Q9NVH0 621 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 ASF1BQ9NVP2 202 aa22.43■■□□□ 1.18
VEGFA-209ENST00000425836 SPENQ96T58 3664 aaKnown RBP22.43■■□□□ 1.18
VEGFA-209ENST00000425836 PRAMEF25A6NGN4 478 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 UTS2O95399 124 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 AGR2O95994 175 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 RFC3P40938 356 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 KCNJ2P63252 427 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 TXNL4AP83876 142 aaKnown RBP22.42■■□□□ 1.18
VEGFA-209ENST00000425836 SNTA1Q13424 505 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 RNFT1Q5M7Z0 435 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 HEPHL1Q6MZM0 1159 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 FAM180AQ6UWF9 173 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 DHDDSQ86SQ9 333 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 TREML1Q86YW5 311 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 POGLUT1Q8NBL1 392 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 OR52N2Q8NGI0 321 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 SDF2Q99470 211 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 GALNT9Q9HCQ5 603 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 TUBA8Q9NY65 449 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-209ENST00000425836 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.42■■□□□ 1.18
VEGFA-209ENST00000425836 FADS1O60427 444 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 SNX4O95219 450 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 CRYABP02511 175 aaKnown RBP22.42■■□□□ 1.18
VEGFA-209ENST00000425836 MAGEA8P43361 318 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 NFYCQ13952 458 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 ARHGAP11BQ3KRB8 267 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 COQ5Q5HYK3 327 aa22.42■■□□□ 1.18
VEGFA-209ENST00000425836 ATAD3BQ5T9A4 648 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms