RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ZNF180Q9UJW8 692 aa13.49□□□□□ -0.25
ATG4B-209ENST00000425239 PRR14LQ5THK1 2151 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 SERTM1A2A2V5 107 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 OR2M5A3KFT3 312 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 FAM171A2A8MVW0 826 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 KLF4O43474 513 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 SMPD2O60906 423 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 PAX1P15863 534 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 TCEA1P23193 301 aaKnown RBP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 GCAP28676 217 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 ECHS1P30084 290 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 EVI2BP34910 448 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 PHBP35232 272 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 ETF1P62495 437 aaKnown RBP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 OCRLQ01968 901 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 CSTF3Q12996 717 aaKnown RBP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 CAPRIN1Q14444 709 aaKnown RBP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 ZNF678Q5SXM1 525 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 APOOLQ6UXV4 268 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 ZNF550Q7Z398 422 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 P3H2Q8IVL5 708 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 SLC44A2Q8IWA5 706 aaPredicted RBP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 UBQLNLQ8IYU4 475 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 EXOSC8Q96B26 276 aaKnown RBP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 PIK3IP1Q96FE7 263 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 ZNF845Q96IR2 970 aaPredicted RBP13.48□□□□□ -0.25
ATG4B-209ENST00000425239 TAS2R7Q9NYW3 318 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 MED11Q9P086 117 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 TMEM216Q9P0N5 145 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 DKKL1Q9UK85 242 aa13.48□□□□□ -0.25
ATG4B-209ENST00000425239 SVEP1Q4LDE5 3571 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 A0A087WV62 115 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 TRIM64A6NGJ6 449 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 TRIM64BA6NI03 449 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 TRIM49D1C9J1S8 452 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 C16orf97H3BN30 126 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 PCDH7O60245 1069 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 DLX3O60479 287 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 INHBAP08476 426 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 SERPINB9P50453 376 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 YTHDF3Q7Z739 585 aaKnown RBP13.47□□□□□ -0.25
ATG4B-209ENST00000425239 GGNQ86UU5 652 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 SAMD14Q8IZD0 417 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-209ENST00000425239 METTL25Q8N6Q8 603 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 CNEP1R1Q8N9A8 125 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 OR5M1Q8NGP8 315 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 UHMK1Q8TAS1 419 aaKnown RBP13.47□□□□□ -0.25
ATG4B-209ENST00000425239 FNDC9Q8TBE3 224 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 MTBPQ96DY7 904 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 TMEM237Q96Q45 408 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 ZNF382Q96SR6 550 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 GSX2Q9BZM3 304 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 ZNF226Q9NYT6 803 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 TAS2R9Q9NYW1 312 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
ATG4B-209ENST00000425239 ADAM21Q9UKJ8 722 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 C19orf53Q9UNZ5 99 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-209ENST00000425239 ZNF175Q9Y473 711 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 COL6A5A8TX70 2615 aa13.47□□□□□ -0.25
ATG4B-209ENST00000425239 IGLV3-32A0A0A0MS00 114 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 LINC01387J3KSC0 135 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 UPK1AO00322 258 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 ULK1O75385 1050 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 AQP8O94778 261 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 KRT6AP02538 564 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 KRT6BP04259 564 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 POU2F1P14859 743 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 HK1P19367 917 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 IMPDH1P20839 514 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 FPR1P21462 350 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 IL12BP29460 328 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 CASQ1P31415 396 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 TIA1P31483 386 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATG4B-209ENST00000425239 MPIP34949 423 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 KRT6CP48668 564 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 HEPACAMQ14CZ8 416 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 RASA2Q15283 850 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATG4B-209ENST00000425239 GLYR1Q49A26 553 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-209ENST00000425239 CYP27C1Q4G0S4 372 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 SYT10Q6XYQ8 523 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 TIFABQ6ZNK6 161 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 P4HA3Q7Z4N8 544 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 C17orf53Q8N3J3 647 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-209ENST00000425239 OR4K17Q8NGC6 315 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 METTL6Q8TCB7 284 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 NUDT8Q8WV74 236 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 C1GALT1C1Q96EU7 318 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 FAM111AQ96PZ2 611 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 MED18Q9BUE0 208 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 PINK1Q9BXM7 581 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 STMN4Q9H169 189 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-209ENST00000425239 UBTD1Q9HAC8 227 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 PLSCR4Q9NRQ2 329 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 PPP4R1LQ9P1A2 415 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 HIVEP2P31629 2446 aa13.46□□□□□ -0.25
ATG4B-209ENST00000425239 SCO2O43819 266 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 SUPT7LO94864 414 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms