RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 KRT20P35900 424 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 CRATP43155 626 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 CPA2P48052 419 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 MTPNP58546 118 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 DSTNP60981 165 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 FUT5Q11128 374 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 DCST2Q5T1A1 773 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 ATAD3BQ5T9A4 648 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 NANOGP8Q6NSW7 305 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 C10orf111Q8N326 155 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 ZNF843Q8N446 348 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 RBMXL3Q8N7X1 1067 aaKnown RBP15.63■□□□□ 0.09
COL7A1-202ENST00000422991 GOLM1Q8NBJ4 401 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 FAM13CQ8NE31 585 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 CHDHQ8NE62 594 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-202ENST00000422991 OR10G3Q8NGC4 313 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 OR8J3Q8NGG0 315 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 XAGE5Q8WWM1 108 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 HGDQ93099 445 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 SGCZQ96LD1 299 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 COL21A1Q96P44 957 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 GPATCH1Q9BRR8 931 aaKnown RBP15.63■□□□□ 0.09
COL7A1-202ENST00000422991 NANOGQ9H9S0 305 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 SH2D2AQ9NP31 389 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 EXD2Q9NVH0 621 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 MRTO4Q9UKD2 239 aaKnown RBP15.63■□□□□ 0.09
COL7A1-202ENST00000422991 CHCHD2Q9Y6H1 151 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-202ENST00000422991 SPTA1P02549 2419 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 BSNQ9UPA5 3926 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 PRAMEF27A3QJZ7 478 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 UGT2B11O75310 529 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 TNFRSF21O75509 655 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 SLC25A12O75746 678 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 PNLIPRP2P54317 469 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 PSMD4P55036 377 aaKnown RBP15.62■□□□□ 0.09
COL7A1-202ENST00000422991 EFR3AQ14156 821 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL7A1-202ENST00000422991 ARHGAP11BQ3KRB8 267 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 CCNJQ5T5M9 372 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 DESI1Q6ICB0 168 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 SPINK14Q6IE38 97 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 C8orf82Q6P1X6 216 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-202ENST00000422991 FIGNL1Q6PIW4 674 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 C16orf62Q7Z3J2 963 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 MDGA2Q7Z553 956 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 ZAR1Q86SH2 424 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 GALNT10Q86SR1 603 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 CATSPER1Q8NEC5 780 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 OR5M3Q8NGP4 307 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 PAQR8Q8TEZ7 354 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 ADOQ96SZ5 270 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL7A1-202ENST00000422991 SLC25A18Q9H1K4 315 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 FBXO34Q9NWN3 711 aa15.62■□□□□ 0.09
COL7A1-202ENST00000422991 THUMPD1Q9NXG2 353 aaKnown RBP15.62■□□□□ 0.09
COL7A1-202ENST00000422991 FASNP49327 2511 aaKnown RBP15.62■□□□□ 0.09
COL7A1-202ENST00000422991 C15orf38-AP3S2A0A0A6YYH1 394 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 TRAV17A0A0B4J275 112 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 CCT8L1PA6NM43 557 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 TP53I11O14683 189 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 CCL3P10147 92 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 ESRRAP11474 423 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-202ENST00000422991 CYP4B1P13584 511 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 SLC6A2P23975 617 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 RFX3P48380 749 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 ART3Q13508 389 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 RABL3Q5HYI8 236 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 Q6ZS92 163 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 NUP54Q7Z3B4 507 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 ARPINQ7Z6K5 226 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 FBXW8Q8N3Y1 598 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 PSD4Q8NDX1 1056 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 SPPL2AQ8TCT8 520 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 RNF138Q8WVD3 245 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 SCMH1Q96GD3 660 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 NSL1Q96IY1 281 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 SECISBP2Q96T21 854 aaKnown RBP15.61■□□□□ 0.09
COL7A1-202ENST00000422991 SDF2Q99470 211 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 G6PC3Q9BUM1 346 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 THUMPD3Q9BV44 507 aaKnown RBP15.61■□□□□ 0.09
COL7A1-202ENST00000422991 HES7Q9BYE0 225 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 ZNF350Q9GZX5 532 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 KAT8Q9H7Z6 458 aaKnown RBP15.61■□□□□ 0.09
COL7A1-202ENST00000422991 A4GALTQ9NPC4 353 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 TIMMDC1Q9NPL8 285 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 P2RX2Q9UBL9 471 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 LIPT1Q9Y234 373 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 EML6Q6ZMW3 1958 aa15.61■□□□□ 0.09
COL7A1-202ENST00000422991 COL6A6A6NMZ7 2263 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 NME2P1O60361 137 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 ICOSLGO75144 302 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 UBOX5O94941 541 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 NUDT7P0C024 238 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 T-ENOLP0DO92 83 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 CD46P15529 392 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 NME2P22392 152 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 CALB2P22676 271 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 LCN1P31025 176 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 MNAT1P51948 309 aa15.6■□□□□ 0.09
COL7A1-202ENST00000422991 ZNF169Q14929 603 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms