RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SLC28A1O00337 649 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 DVL2O14641 736 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 LSM1O15116 133 aaKnown RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 TBX19O60806 448 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 TRIM13O60858 407 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 COQ9O75208 318 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 SEC22BO75396 215 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 IL2RAP01589 272 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 IGKV1D-16P01601 117 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 FGF4P08620 206 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 CREB1P16220 341 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 IL12BP29460 328 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 ALDH3A1P30838 453 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 EVI2BP34910 448 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 STARP49675 285 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 FOXF2Q12947 444 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 CYP27C1Q4G0S4 372 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 RFTN2Q52LD8 501 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 ANKRD26P1Q6NSI1 321 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 RIBC1Q8N443 379 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 CCDC63Q8NA47 563 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 OR6Y1Q8NGX8 325 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 OR14L1PQ8NHC6 308 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 AENQ8WTP8 325 aaKnown RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 RNASE6Q93091 150 aaKnown RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 GFM2Q969S9 779 aaKnown RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 CIDECQ96AQ7 238 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 GIMAP5Q96F15 307 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 TRIB1Q96RU8 372 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 CCT7Q99832 543 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 TRMOQ9BU70 441 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 C1orf109Q9NX04 203 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 TAS2R10Q9NYW0 307 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 SENP1Q9P0U3 644 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 CLCF1Q9UBD9 225 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 ITGB1BP2Q9UKP3 347 aa10.01□□□□□ -0.81
SSBP3-206ENST00000420121 TLDC2A0PJX2 215 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 GXYLT2A0PJZ3 443 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 HCRTR2O43614 444 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 CRCPO75575 148 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 CTAG2O75638 210 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 IL33O95760 270 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 LINC00032P0C843 101 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF708P17019 499 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 CTSSP25774 331 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 NTSP30990 170 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 AGFG1P52594 562 aaKnown RBP10□□□□□ -0.81
SSBP3-206ENST00000420121 CLDN15P56746 228 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 MYBPHQ13203 477 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 XKR7Q5GH72 579 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 ARL13AQ5H913 290 aaPredicted RBP10□□□□□ -0.81
SSBP3-206ENST00000420121 EXOSC6Q5RKV6 272 aaKnown RBP10□□□□□ -0.81
SSBP3-206ENST00000420121 SH2D4BQ5SQS7 431 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 CES4AQ5XG92 561 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 APOOLQ6UXV4 268 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 IFNEQ86WN2 208 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 ZZZ3Q8IYH5 903 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 OR2M3Q8NG83 312 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 CLHC1Q8NHS4 586 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 TSSK3Q96PN8 268 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 FAM111AQ96PZ2 611 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 REEP4Q9H6H4 257 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 DDX18Q9NVP1 670 aaKnown RBP10□□□□□ -0.81
SSBP3-206ENST00000420121 CRIM1Q9NZV1 1036 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 NTMQ9P121 344 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 GIMAP2Q9UG22 337 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 BAIAP2L1Q9UHR4 511 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 MID2Q9UJV3 735 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 CBLCQ9ULV8 474 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 FIS1Q9Y3D6 152 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 OR10H1Q9Y4A9 318 aa10□□□□□ -0.81
SSBP3-206ENST00000420121 MTORP42345 2549 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 CLCA1A8K7I4 914 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 PIP5K1BO14986 540 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 PDPK1O15530 556 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 RGS14O43566 566 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 SCO2O43819 266 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 NPHS1O60500 1241 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 SPAG7O75391 227 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 NKX2-2O95096 273 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 TGM6O95932 706 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 IL18BPO95998 194 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 NUDT7P0C024 238 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 NEFHP12036 1026 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 BCKDHAP12694 445 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 CHMP24386 653 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 DPP4P27487 766 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 UQCRC1P31930 480 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 KRT20P35900 424 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 KIR2DL3P43628 341 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 DSCR4P56555 118 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-206ENST00000420121 RPL38P63173 70 aaKnown RBP9.99□□□□□ -0.81
SSBP3-206ENST00000420121 SRYQ05066 204 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 HSPB3Q12988 150 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 RCAN2Q14206 197 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 SF3B4Q15427 424 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■■■ 27.3
SSBP3-206ENST00000420121 FLYWCH1Q4VC44 716 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 SPNS3Q6ZMD2 512 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 ZCCHC23Q6ZST2 131 aa9.99□□□□□ -0.81
SSBP3-206ENST00000420121 TCP10LQ8TDR4 215 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms