RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CDK15Q96Q40 435 aa9.15□□□□□ -0.94
TNFAIP3-202ENST00000420009 OR10A4Q9H209 315 aa9.15□□□□□ -0.94
TNFAIP3-202ENST00000420009 ZBTB26Q9HCK0 441 aa9.15□□□□□ -0.94
TNFAIP3-202ENST00000420009 PLSCR4Q9NRQ2 329 aa9.15□□□□□ -0.94
TNFAIP3-202ENST00000420009 LAMP3Q9UQV4 416 aa9.15□□□□□ -0.94
TNFAIP3-202ENST00000420009 ZNF337Q9Y3M9 751 aa9.15□□□□□ -0.94
TNFAIP3-202ENST00000420009 OR2M5A3KFT3 312 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 SS18L1O75177 396 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 NME6O75414 186 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 ALDOAP04075 364 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 SOD3P08294 240 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 DANCRP0C864 163 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 CTAGE8P0CG41 777 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 FAM157CP0CG43 387 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 TCP1P17987 556 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 HK1P19367 917 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 IL11P20809 199 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 IL12BP29460 328 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 EVI2BP34910 448 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 IDUAP35475 653 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 DEKP35659 375 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 SLC6A8P48029 635 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 PNLIPRP2P54317 469 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 IRF9Q00978 393 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 GALNT1Q10472 559 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 TRAF3Q13114 568 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 CHRFAM7AQ494W8 412 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 FAM180BQ6P0A1 224 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 GGNQ86UU5 652 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 CTAGE4Q8IX94 777 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 LILRB1Q8NHL6 650 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 RAB3IL1Q8TBN0 382 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 GFM2Q969S9 779 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 TM4SF18Q96CE8 201 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 TRMT61AQ96FX7 289 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 ACTR6Q9GZN1 396 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 STMN4Q9H169 189 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 SLCO5A1Q9H2Y9 848 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 DSN1Q9H410 356 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 NOL11Q9H8H0 719 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 ANKRA2Q9H9E1 313 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 YAE1D1Q9NRH1 226 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 AHSPQ9NZD4 102 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 PPP4R1LQ9P1A2 415 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 WHRNQ9P202 907 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 PSME2Q9UL46 239 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 EMC9Q9Y3B6 208 aa9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 TNPO3Q9Y5L0 923 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-202ENST00000420009 A8MV72 311 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 H3BML4 177 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 EIF3HO15372 352 aaKnown RBP eCLIP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 SCO2O43819 266 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 FADS1O60427 444 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 BCAS2O75934 225 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 IGHV4-39P01824 125 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 GSTA2P09210 222 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 PSMB1P20618 241 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 KRT20P35900 424 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 ACVR1BP36896 505 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 RPS3AP61247 264 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 MRPS22P82650 360 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 ACAP2Q15057 778 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 FAM83EQ2M2I3 478 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 TMEM44Q2T9K0 475 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 GGTA1PQ4G0N0 100 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 C3orf62Q6ZUJ4 267 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 CCDC91Q7Z6B0 441 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 CTAGE3PQ8IX95 158 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 PPM1NQ8N819 430 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 OR4N2Q8NGD1 307 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 OR5M1Q8NGP8 315 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 FBXW5Q969U6 566 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 EFHD2Q96C19 240 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 C1GALT1C1Q96EU7 318 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 ZBED6CLQ96FA7 236 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 GMPPAQ96IJ6 420 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 GPR78Q96P69 363 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 NTMT1Q9BV86 223 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 RTN4RQ9BZR6 473 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 FOLH1BQ9HBA9 442 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 ABCG2Q9UNQ0 655 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 SNX24Q9Y343 169 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 RNF115Q9Y4L5 304 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 MAGED1Q9Y5V3 778 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 AP4B1Q9Y6B7 739 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 ZNF780BQ9Y6R6 833 aa9.13□□□□□ -0.95
TNFAIP3-202ENST00000420009 A0A096LNT2 108 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 PLOD3O60568 738 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 C2P06681 752 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 CDKN1AP38936 164 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 CCNG1P51959 295 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 PSG6Q00889 435 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 IFT88Q13099 833 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 STX5Q13190 355 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 ERCC6LQ2NKX8 1250 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 KRTAP24-1Q3LI83 254 aa9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 GLYR1Q49A26 553 aaPredicted RBP9.12□□□□□ -0.95
TNFAIP3-202ENST00000420009 TECRLQ5HYJ1 363 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms