RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 C16orf62Q7Z3J2 963 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PQLC1Q8N2U9 271 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 M1APQ8TC57 530 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 CT55Q8WUE5 264 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 CDS1Q92903 461 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 SLC35B4Q969S0 331 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 HSPBAP1Q96EW2 488 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 LCORQ96JN0 433 aaPredicted RBP13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 IMMP1LQ96LU5 166 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 YIPF4Q9BSR8 244 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 NUDT9Q9BW91 350 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PTRH2Q9Y3E5 179 aaKnown RBP13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 KCNE3Q9Y6H6 103 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 TEX51A0A1B0GUA7 166 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 AGAP5A6NIR3 686 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 AGRPO00253 132 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 ICAM2P13598 275 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 NAGAP17050 411 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 CD247P20963 164 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 GABRA3P34903 492 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 PSMD4P55036 377 aaKnown RBP13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 SLC26A5P58743 744 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 KCNJ10P78508 379 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 KCNC4Q03721 635 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF155Q12901 538 aaPredicted RBP13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 GK3PQ14409 553 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 FBXW10Q5XX13 1052 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 TYW3Q6IPR3 259 aaKnown RBP13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 NPSR1Q6W5P4 371 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 HSDL2Q6YN16 418 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 NDUFAF7Q7L592 441 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 C9orf40Q8IXQ3 194 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 PRSS58Q8IYP2 241 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 COX18Q8N8Q8 333 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 GPR151Q8TDV0 419 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 ELP5Q8TE02 316 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 C7orf34Q96L11 122 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 IP6K3Q96PC2 410 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 CHID1Q9BWS9 393 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 PINK1Q9BXM7 581 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 OR8D2Q9GZM6 311 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 WWTR1Q9GZV5 400 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 TRIM45Q9H8W5 580 aaPredicted RBP13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 MMP25Q9NPA2 562 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 AGPAT4Q9NRZ5 378 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 THSD1Q9NS62 852 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 STOML1Q9UBI4 398 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 MRTO4Q9UKD2 239 aaKnown RBP13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 CBLCQ9ULV8 474 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 DTX4Q9Y2E6 619 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 WDR45Q9Y484 360 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 DSPP15924 2871 aaKnown RBP13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 APC2O95996 2303 aa13.2□□□□□ -0.3
SHMT1P1-201ENST00000419974 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 FAM149AA5PLN7 773 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 SOCS6O14544 535 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 FCMRO60667 390 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZIC2O95409 532 aaPredicted RBP13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 NGFRP08138 427 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 PABPC4LP0CB38 370 aaKnown RBP13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 COX6A1P12074 109 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ADH7P40394 386 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 RNF4P78317 190 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 HPCAP84074 193 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 CHRNEQ04844 493 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 DNASE1L3Q13609 305 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF141Q15928 474 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 SNCBQ16143 134 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 GPAT3Q53EU6 434 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 LRRC23Q53EV4 343 aaPredicted RBP13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 TBCELQ5QJ74 424 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 KIRREL2Q6UWL6 708 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ENPP6Q6UWR7 440 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 SHISA6Q6ZSJ9 500 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 KBTBD2Q8IY47 623 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF619Q8N2I2 560 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 SLC15A4Q8N697 577 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 TMEM102Q8N9M5 508 aaPredicted RBP13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 OR11G2Q8NGC1 345 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 OR5L2Q8NGL0 311 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 SPPL2AQ8TCT8 520 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 GEMIN6Q8WXD5 167 aaKnown RBP13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 NKD1Q969G9 470 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF354BQ96LW1 612 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ITPAQ9BY32 194 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 HOXD1Q9GZZ0 328 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 RIMS3Q9UJD0 308 aa13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF223Q9UK11 482 aaPredicted RBP13.19□□□□□ -0.3
SHMT1P1-201ENST00000419974 CDK2AP1O14519 115 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 IL33O95760 270 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 LGI1O95970 557 aa13.18□□□□□ -0.3
SHMT1P1-201ENST00000419974 DBIP07108 87 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms