RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TMIGD3P0DMS9 266 aaPredicted RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 UROSP10746 265 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 CPA3P15088 417 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 CHMP24386 653 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 GRK2P25098 689 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 NTSP30990 170 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 MC3RP41968 323 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 STARP49675 285 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 DGKQP52824 942 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 ART1P52961 327 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 IST1P53990 364 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 PSG6Q00889 435 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 ZNF155Q12901 538 aaPredicted RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 GAB1Q13480 694 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 DAZAP2Q15038 168 aaPredicted RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 CYP27C1Q4G0S4 372 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 SH2D4BQ5SQS7 431 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 NOXRED1Q6NXP6 359 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 TMEM107Q6UX40 140 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 KIF18BQ86Y91 864 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 BANPQ8N9N5 519 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 CCDC63Q8NA47 563 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 GOT1L1Q8NHS2 421 aaPredicted RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 NINJ1Q92982 152 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 METTL2AQ96IZ6 378 aaKnown RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 SFXN2Q96NB2 322 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 TM9SF2Q99805 663 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 GPATCH1Q9BRR8 931 aaKnown RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 CLEC4MQ9H2X3 399 aaPredicted RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 GLIPR2Q9H4G4 154 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 TNFRSF12AQ9NP84 129 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 CBLCQ9ULV8 474 aa8.56□□□□□ -1.04
NUP50-205ENST00000419387 C19orf53Q9UNZ5 99 aaPredicted RBP8.56□□□□□ -1.04
NUP50-205ENST00000419387 SPG11Q96JI7 2443 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 KIAA1549Q9HCM3 1950 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 TUBAL3A6NHL2 446 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 CLCA1A8K7I4 914 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 EEF1E1-BLOC1S5C9J1V9 151 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 NPIPB8E9PQR5 432 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 UPK1AO00322 258 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 SLC28A1O00337 649 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 COPEO14579 308 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 EEF1E1O43324 174 aaKnown RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 FADS1O60427 444 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 SEC22BO75396 215 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 PSMG1O95456 288 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 EPXP11678 715 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 ZNF708P17019 499 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 KRT4P19013 534 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 PRPH2P23942 346 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 TACR1P25103 407 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 DPP4P27487 766 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 EVI2BP34910 448 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 LHX2P50458 406 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 DSCR4P56555 118 aaPredicted RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 CLDN18P56856 261 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 SORDQ00796 357 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 FOXF2Q12947 444 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 MPP2Q14168 576 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 KIAA0040Q15053 153 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 ZNHIT3Q15649 155 aaPredicted RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 BCL2A1Q16548 175 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 DECR1Q16698 335 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 LIPMQ5VYY2 423 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 IKBIPQ70UQ0 350 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 EXOC3L1Q86VI1 746 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 OR2L13Q8N349 312 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 RIBC1Q8N443 379 aaPredicted RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 OR4K17Q8NGC6 315 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 LINC01560Q8TB33 94 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 INTS12Q96CB8 462 aaKnown RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 ELP4Q96EB1 424 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 EGLN2Q96KS0 407 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 ZFP3Q96NJ6 502 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 AMDHD1Q96NU7 426 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 G6PC3Q9BUM1 346 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 SFXN3Q9BWM7 321 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 ACBD3Q9H3P7 528 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 LIME1Q9H400 295 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 DSN1Q9H410 356 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 SDHAF3Q9NRP4 125 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 CCM2LQ9NUG4 571 aaPredicted RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 DDX18Q9NVP1 670 aaKnown RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 PPP4R1LQ9P1A2 415 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 CLCF1Q9UBD9 225 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 ST6GALNAC2Q9UJ37 374 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 DKKL1Q9UK85 242 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 MRTO4Q9UKD2 239 aaKnown RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 EDARQ9UNE0 448 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 RPH3AQ9Y2J0 694 aaPredicted RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 CCL27Q9Y4X3 112 aa8.55□□□□□ -1.04
NUP50-205ENST00000419387 ANKRD17O75179 2603 aaKnown RBP8.55□□□□□ -1.04
NUP50-205ENST00000419387 MED12Q93074 2177 aa8.54□□□□□ -1.04
NUP50-205ENST00000419387 TTC36A6NLP5 189 aa8.54□□□□□ -1.04
NUP50-205ENST00000419387 C17orf51A8MQB3 221 aa8.54□□□□□ -1.04
NUP50-205ENST00000419387 B4DXG7 233 aa8.54□□□□□ -1.04
NUP50-205ENST00000419387 AZIN1O14977 448 aa8.54□□□□□ -1.04
NUP50-205ENST00000419387 RGS14O43566 566 aa8.54□□□□□ -1.04
NUP50-205ENST00000419387 SCO2O43819 266 aa8.54□□□□□ -1.04
NUP50-205ENST00000419387 TYROBPO43914 113 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms