RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PARD6BQ9BYG5 372 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 ACPTQ9BZG2 426 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 IQCGQ9H095 443 aaKnown RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 MANSC1Q9H8J5 431 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 LIN28AQ9H9Z2 209 aaKnown RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 MID1IP1Q9NPA3 183 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 NMRK1Q9NWW6 199 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 VPS29Q9UBQ0 182 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 ERRFI1Q9UJM3 462 aaPredicted RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 OSGIN2Q9Y236 505 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 YARS2Q9Y2Z4 477 aaKnown RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 TIMM22Q9Y584 194 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 C1orf226A1L170 272 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 CCDC151A5D8V7 595 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 A8MVJ9 347 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 H3BQF6 201 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 PGRMC2O15173 223 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 PCDH7O60245 1069 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF354AO60765 605 aaPredicted RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 GUCY1B2O75343 617 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 OR6B1O95007 311 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 UNC5CO95185 931 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 LDLRP01130 860 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 GASTP01350 101 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 CLPSP04118 112 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 AMY1AP04745 511 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SLC35E2P0CK97 266 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 CPMP14384 443 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF24P17028 368 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 PIK3R1P27986 724 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 GALNSP34059 522 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SOX3P41225 446 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 MAP2K6P52564 334 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 KCNK10P57789 538 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 RAC3P60763 192 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 TRA2BP62995 288 aaKnown RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ERVK-8P63133 956 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 RAE1P78406 368 aaKnown RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 EBPQ15125 230 aaKnown RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 MAPKAPK3Q16644 382 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SPIN4Q56A73 249 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 CFAP157Q5JU67 520 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 LIPMQ5VYY2 423 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SLC48A1Q6P1K1 146 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SCIMPQ6UWF3 145 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 GFRALQ6UXV0 394 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 MDGA2Q7Z553 956 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ADGRE4PQ86SQ3 457 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 C1QL4Q86Z23 238 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 GPALPP1Q8IXQ4 340 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SRRM1Q8IYB3 904 aaKnown RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 CMTM4Q8IZR5 234 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 MMP21Q8N119 569 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 CPSF7Q8N684 471 aaKnown RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 BANPQ8N9N5 519 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 FAM98AQ8NCA5 519 aaKnown RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 PSD4Q8NDX1 1056 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 OR4K14Q8NGD5 310 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 OR5L2Q8NGL0 311 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 OR5M3Q8NGP4 307 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 NUBPLQ8TB37 319 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 STON2Q8WXE9 905 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 TMEM125Q96AQ2 219 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 TM4SF18Q96CE8 201 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 APIPQ96GX9 242 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ART5Q96L15 291 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 GPR137Q96N19 417 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 FAM111AQ96PZ2 611 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 GAL3ST4Q96RP7 486 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 DMRTA2Q96SC8 542 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ROPN1BQ9BZX4 212 aaPredicted RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 CXorf21Q9HAI6 301 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ROPN1Q9HAT0 212 aaPredicted RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 HPF1Q9NWY4 346 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 SEC14L3Q9UDX4 400 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 MID2Q9UJV3 735 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ERVK-11Q9UQG0 969 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ERVK-19Q9WJR5 959 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 KLF13Q9Y2Y9 288 aaPredicted RBP6.38□□□□□ -1.39
HMGN1-205ENST00000419378 PLLPQ9Y342 182 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 ICE1Q9Y2F5 2266 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 NBPF19A0A087WUL8 3843 aa6.38□□□□□ -1.39
HMGN1-205ENST00000419378 MAST4O15021 2626 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 A0A0G2JMM0 328 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 A0A1W2PPB8 328 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 GNG14A0A1W2PPG7 69 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 A0A1W2PRS3 328 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 GOLGA6L10A6NI86 522 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 OR6C76A6NM76 312 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 KIR3DP1A8MWS1 328 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 NPIPA5E9PKD4 350 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 PEX1O43933 1283 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SPAG7O75391 227 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 CRCPO75575 148 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 ERAL1O75616 437 aaKnown RBP6.37□□□□□ -1.39
HMGN1-205ENST00000419378 WISP2O76076 250 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 NADKO95544 446 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-205ENST00000419378 IL3P08700 152 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 CT62P0C5K7 136 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms