RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ITGA3P26006 1051 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 EEF1DP29692 281 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 HOXC8P31273 242 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 MC5RP33032 325 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CHRNA7P36544 502 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CAPGP40121 348 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SLC26A3P40879 764 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ACADSBP45954 432 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SERPINB10P48595 397 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 NPY2RP49146 381 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 MRPL19P49406 292 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 HLCSP50747 726 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TKTL1P51854 596 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 NDST2P52849 883 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 GABARAPL2P60520 117 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 HNRNPKP61978 463 aaKnown RBP eCLIP2.4□□□□□ -2.03
VPS41-206ENST00000418457 CDKL1Q00532 357 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 MS4A2Q01362 244 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF33AQ06730 810 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 INCA1Q0VD86 236 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 HYAL1Q12794 435 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TCP10Q12799 353 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 MERTKQ12866 999 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 RALGDSQ12967 914 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SPP2Q13103 211 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 KRR1Q13601 381 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 CEACAM7Q14002 265 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PTPRCAPQ14761 206 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PDK1Q15118 436 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TGFBIQ15582 683 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ATP6AP1Q15904 470 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CLPPQ16740 277 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 TRIM16LQ309B1 348 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 KIAA1644Q3SXP7 199 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SLC36A3Q495N2 470 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 NHSL2Q5HYW2 709 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 GLRA4Q5JXX5 417 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 DCAF10Q5QP82 559 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ELFN2Q5R3F8 820 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 RBM48Q5RL73 367 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 ARMC4Q5T2S8 1044 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 IL23RQ5VWK5 629 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 REP15Q6BDI9 236 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 THOC7Q6I9Y2 204 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 OR6B2Q6IFH4 312 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 LCN8Q6JVE9 175 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 RPUSD3Q6P087 351 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 TMEM53Q6P2H8 277 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 DCLRE1AQ6PJP8 1040 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF773Q6PK81 442 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 FAM198BQ6UWH4 519 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 LCLAT1Q6UWP7 414 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CYP4V2Q6ZWL3 525 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 STRADAQ7RTN6 431 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CENPVQ7Z7K6 275 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 LINC00523Q86TU6 105 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TMEM135Q86UB9 458 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 IQCHQ86VS3 1027 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 DHFR2Q86XF0 187 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SLC22A9Q8IVM8 553 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CENPSQ8N2Z9 138 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF786Q8N393 782 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SFRP1Q8N474 314 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 DCLK2Q8N568 766 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PQLC3Q8N755 202 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF781Q8N8C0 355 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 COLGALT1Q8NBJ5 622 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 OR5B17Q8NGF7 314 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 OR13F1Q8NGS4 319 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 OR2T34Q8NGX1 318 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 OR2T3Q8NH03 318 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 FGFBP3Q8TAT2 258 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 GRHL3Q8TE85 626 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SSMEM1Q8WWF3 244 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 RXFP2Q8WXD0 754 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 STARD8Q92502 1023 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ATP6V1E2Q96A05 226 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PPWD1Q96BP3 646 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF501Q96CX3 271 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 HDAC11Q96DB2 347 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TMA16Q96EY4 203 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 VMP1Q96GC9 406 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CENPNQ96H22 339 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 SENP5Q96HI0 755 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF641Q96N77 438 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZMAT2Q96NC0 199 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 AGAP3Q96P47 875 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 DUX3Q96PT4 197 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 OR52B2Q96RD2 323 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 F2RL3Q96RI0 385 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PEBP4Q96S96 227 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CPXM1Q96SM3 734 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 GPR22Q99680 433 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 GPATCH1Q9BRR8 931 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 SNRNP25Q9BV90 132 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 MTMR12Q9C0I1 747 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 S1PR5Q9H228 398 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 RHOJQ9H4E5 214 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ASB7Q9H672 318 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 RPF2Q9H7B2 306 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms