RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PRSS45Q7RTY3 260 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 SZRD1Q7Z422 152 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 VRK3Q8IV63 474 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 IZUMO1Q8IYV9 350 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 CNOT9Q92600 299 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 FOXJ1Q92949 421 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 WDR89Q96FK6 387 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 LRRC46Q96FV0 321 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 NANSQ9NR45 359 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ACTR10Q9NZ32 417 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 GULP1Q9UBP9 304 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 FCF1Q9Y324 198 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ARHGEF33A8MVX0 844 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 A8MXK9 166 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 H7C2Y5 167 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 DNASE2O00115 360 aaPredicted RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 ANKRD34CP0C6C1 535 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 DRD2P14416 443 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 ACRV1P26436 265 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 RAE1P78406 368 aaKnown RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZNF613Q6PF04 617 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 BVESQ8NE79 360 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 TRMT10AQ8TBZ6 339 aaKnown RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 WBP2Q969T9 261 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 SARGQ9BW04 601 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 PLA2G12AQ9BZM1 189 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 ANKDD1BA6NHY2 528 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC38A8A6NNN8 435 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 TMEM189-UBE2V1I3L0A0 370 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 FAAHO00519 579 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 XPAP23025 273 aaPredicted RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 MMP11P24347 488 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 CSNK1DP48730 415 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 VEGFCP49767 419 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 GDI2P50395 445 aaKnown RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 OC90Q02509 493 aaPredicted RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 MLLT1Q03111 559 aaPredicted RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 RAB40BQ12829 278 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC25A25Q6KCM7 469 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 NCEH1Q6PIU2 408 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 CD200R1LQ6Q8B3 271 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 ARIH2OSQ8N7S6 290 aa13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 TEFMQ96QE5 360 aaKnown RBP13.83□□□□□ -0.2
NCKIPSD-204ENST00000416649 KNL1Q8NG31 2342 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 A0A0B4J203 849 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 GAPDHSO14556 408 aaPredicted RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 PRODHO43272 600 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 FZD7O75084 574 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 PEPDP12955 493 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 CDH11P55287 796 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 RHOAP61586 193 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 POLR2GP62487 172 aaKnown RBP eCLIP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 MRPL58Q14197 206 aaKnown RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 MELKQ14680 651 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 RNLSQ5VYX0 342 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 RNF219Q5W0B1 726 aaPredicted RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 PODNL1Q6PEZ8 512 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 OAFQ86UD1 273 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 UXS1Q8NBZ7 420 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 PPCDCQ96CD2 204 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 FCRL1Q96LA6 429 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 CFHR5Q9BXR6 569 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 ARL6Q9H0F7 186 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 EXOSC1Q9Y3B2 195 aaKnown RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 AP1M2Q9Y6Q5 423 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 ARRDC5A6NEK1 342 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR6C75A6NL08 312 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 F8W036 122 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 M0R3H8 397 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 RNASET2O00584 256 aaKnown RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 SGTAO43765 313 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 SOX30O94993 753 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 WNT1P04628 370 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 RPS13P62277 151 aaKnown RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 SIM1P81133 766 aaPredicted RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 FAM209BQ5JX69 171 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 REEP3Q6NUK4 255 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 TMEM88Q6PEY1 159 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 OLIG3Q7RTU3 272 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 FGD2Q7Z6J4 655 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 BOLLQ8N9W6 283 aaKnown RBP13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 GPR32P1Q8NGA4 272 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR4K5Q8NGD3 323 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 GANCQ8TET4 914 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 MYLIPQ8WY64 445 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 TMEM169Q96HH4 297 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 GPA33Q99795 319 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 FUZQ9BT04 418 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 GSDMCQ9BYG8 508 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 EVA1AQ9H8M9 152 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 RPS6KB2Q9UBS0 482 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 NDOR1Q9UHB4 597 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 IL20RAQ9UHF4 553 aa13.82□□□□□ -0.2
NCKIPSD-204ENST00000416649 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 KDELR3O43731 214 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 NFYAP23511 347 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 RBMS1P29558 406 aaKnown RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC6A11P48066 632 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR5M10Q6IEU7 315 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC36A4Q6YBV0 504 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms