RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SPAG7O75391 227 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 SEC22BO75396 215 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 CBR3O75828 277 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 NUDT17P0C025 328 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 CPN1P15169 458 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 ZNF708P17019 499 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 NTSP30990 170 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 RPL38P63173 70 aaKnown RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 SRYQ05066 204 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 HSPB3Q12988 150 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 GAB1Q13480 694 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 PDE7AQ13946 482 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 UGT3A2Q3SY77 523 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 RFTN2Q52LD8 501 aaPredicted RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 RNF165Q6ZSG1 346 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 ZCCHC23Q6ZST2 131 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 IFNEQ86WN2 208 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 CNPY4Q8N129 248 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 OR2M3Q8NG83 312 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 AENQ8WTP8 325 aaKnown RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 HOXB13Q92826 284 aaPredicted RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 RNASE6Q93091 150 aaKnown RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 TSSK3Q96PN8 268 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 FAM111AQ96PZ2 611 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 CCT7Q99832 543 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 LMF2Q9BU23 707 aaKnown RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 C1orf109Q9NX04 203 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 JKAMPQ9P055 326 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 LGALS13Q9UHV8 139 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 RPH3AQ9Y2J0 694 aaPredicted RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 OR10H1Q9Y4A9 318 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 MTORP42345 2549 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 HEATR5AQ86XA9 2040 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 FAM221AA4D161 298 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 H0Y3Z8 333 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 SYT5O00445 386 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 AKAP10O43572 662 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 TRIM13O60858 407 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 CTAG2O75638 210 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 IL2RAP01589 272 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 LINC00032P0C843 101 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 EFNA1P20827 205 aaPredicted RBP13.68□□□□□ -0.22
UBXN4-203ENST00000416538 MAP3K8P41279 467 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 CLDN15P56746 228 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 STX5Q13190 355 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 CES4AQ5XG92 561 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 APOOLQ6UXV4 268 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 GCNT2Q8N0V5 402 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 ZPLD1Q8TCW7 415 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 NUDT8Q8WV74 236 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 TWIST2Q8WVJ9 160 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 GIMAP5Q96F15 307 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 ZNF764Q96H86 408 aaPredicted RBP13.68□□□□□ -0.22
UBXN4-203ENST00000416538 SFXN2Q96NB2 322 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 GPATCH1Q9BRR8 931 aaKnown RBP13.68□□□□□ -0.22
UBXN4-203ENST00000416538 LIME1Q9H400 295 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 DSN1Q9H410 356 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 EQTNQ9NQ60 294 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 ZNF629Q9UEG4 869 aaPredicted RBP13.68□□□□□ -0.22
UBXN4-203ENST00000416538 BAIAP2L1Q9UHR4 511 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 DKKL1Q9UK85 242 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 CBLCQ9ULV8 474 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 ITPR3Q14573 2671 aa13.68□□□□□ -0.22
UBXN4-203ENST00000416538 ZNF469Q96JG9 3925 aaPredicted RBP13.68□□□□□ -0.22
UBXN4-203ENST00000416538 PRR14LQ5THK1 2151 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 H0YC42 278 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 SLC28A1O00337 649 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 PIP5K1BO14986 540 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 PDPK1O15530 556 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 HCRTR2O43614 444 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 SLITRK5O94991 958 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 ZWINTO95229 277 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 TGM6O95932 706 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 TMIGD3P0DMS9 266 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 DPP4P27487 766 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 DNAJA1P31689 397 aaKnown RBP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 KRT20P35900 424 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 FRKP42685 505 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 TPD52P55327 224 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 FLYWCH1Q4VC44 716 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 XKR7Q5GH72 579 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 ARL13AQ5H913 290 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 ZAR1Q86SH2 424 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 GALNT10Q86SR1 603 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 OR5M1Q8NGP8 315 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 FBXO30Q8TB52 745 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 AGR3Q8TD06 166 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 PIK3R3Q92569 461 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 METTL2AQ96IZ6 378 aaKnown RBP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 KLHDC3Q9BQ90 382 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 CALHM2Q9HA72 323 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 PPP4R1LQ9P1A2 415 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 MID2Q9UJV3 735 aa13.67□□□□□ -0.22
UBXN4-203ENST00000416538 WBP11Q9Y2W2 641 aaKnown RBP13.67□□□□□ -0.22
UBXN4-203ENST00000416538 EEF1E1-BLOC1S5C9J1V9 151 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 EEF1E1O43324 174 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms