RNA–Protein interactions for RNA: ENST00000416081.5

SSFA2-204, Transcript of Sperm-specific antigen 2, humanhuman

TSL 1 (best)

Gene SSFA2, Length 5,067 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-204ENST00000416081 LIMS3P0CW19 117 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 LIMS4P0CW20 117 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 RAB3BP20337 219 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 S100A11P31949 105 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 DSC1Q08554 894 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 STX4Q12846 297 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 DLK2Q6UY11 383 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 PRICKLE2Q7Z3G6 844 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 MRPL10Q7Z7H8 261 aaKnown RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 HORMAD2Q8N7B1 307 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 ELP4Q96EB1 424 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SENP5Q96HI0 755 aaPredicted RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 FAIM2Q9BWQ8 316 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 A4GALTQ9NPC4 353 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 TMEM138Q9NPI0 162 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 BRCA1P38398 1863 aaKnown RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 ANKRD36A6QL64 1941 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 ZSWIM8A7E2V4 1837 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 A0A1W2PRQ8 180 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 TRABD2BA6NFA1 517 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SLC9B1P1A6NJY1 282 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF98A6NK75 572 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 OAZ2O95190 189 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 GIPP09681 153 aaPredicted RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 GALP22466 123 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SHC1P29353 583 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 RAE1P78406 368 aaKnown RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 MC2RQ01718 297 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 MLLT1Q03111 559 aaPredicted RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 HTR4Q13639 388 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SPRYD7Q5W111 196 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 LRRN1Q6UXK5 716 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF783Q6ZMS7 281 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SLC9B2Q86UD5 537 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 IFNL1Q8IU54 200 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 RBM45Q8IUH3 476 aaKnown RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 GID4Q8IVV7 300 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SPAG16Q8N0X2 631 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 TTC9BQ8N6N2 239 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 PDXPQ96GD0 296 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 PPP1R16AQ96I34 528 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SLC35G5Q96KT7 338 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 CXorf58Q96LI9 332 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 HMX1Q9NP08 348 aaPredicted RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 BABAM2Q9NXR7 383 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 SLCO1C1Q9NYB5 712 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 MRPL15Q9P015 296 aaKnown RBP6.88□□□□□ -1.31
SSFA2-204ENST00000416081 FBXL2Q9UKC9 423 aa6.88□□□□□ -1.31
SSFA2-204ENST00000416081 A0A0U1RQF3 1178 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 OR2AG2A6NM03 316 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 TEX46H3BTG2 121 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 CACNB4O00305 520 aaPredicted RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ARPC1BO15143 372 aaKnown RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 FZD6O60353 706 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 SOCS5O75159 536 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 RGS11O94810 467 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ETHE1O95571 254 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 FGBP02675 491 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 RPLP2P05387 115 aaKnown RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 RORAP35398 523 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 FAUP35544 74 aaKnown RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 CSKP41240 450 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 SLC6A11P48066 632 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 KCNJ5P48544 419 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 MAP4K2Q12851 820 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 KRT33BQ14525 404 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 INSL4Q14641 139 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF311Q5JNZ3 666 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 GSG1LQ6UXU4 331 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 TPRG1Q6ZUI0 275 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 C6orf120Q7Z4R8 191 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 OR52H1Q8NGJ2 320 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 EID2BQ96D98 161 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 LRRC46Q96FV0 321 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 MVB12BQ9H7P6 319 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 GPATCH2Q9NW75 528 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 STOX2Q9P2F5 926 aaPredicted RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF646O15015 1829 aaPredicted RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 D6RAR5 112 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 NFKBIEO00221 500 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 GNB5O14775 395 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 SYN3O14994 580 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 FLRT2O43155 660 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 MTX2O75431 263 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 RASGRP1O95267 797 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 PSMB1P20618 241 aaKnown RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 MVDP53602 400 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 PRKAG1P54619 331 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 EPHA4P54764 986 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ERVK-25P63136 954 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 DGCR2P98153 550 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 LRFN4Q6PJG9 635 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF322Q6U7Q0 402 aaPredicted RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 TFAP2EQ6VUC0 442 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ZER1Q7Z7L7 766 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 OR5W2Q8NH69 310 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 NR4A3Q92570 626 aa6.87□□□□□ -1.31
SSFA2-204ENST00000416081 EXOSC8Q96B26 276 aaKnown RBP6.87□□□□□ -1.31
SSFA2-204ENST00000416081 ECHDC3Q96DC8 303 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms