RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 IRGMA1A4Y4 181 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 ZAR1LA6NP61 321 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 FAM47E-STBD1D6RA91 191 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 UGT2B17O75795 530 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 KCNK2O95069 426 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 TRAPPC2P0DI81 140 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 TRAPPC2BP0DI82 140 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 ARAFP10398 606 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 ETFAP13804 333 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 FUT4P22083 530 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 CBLP22681 906 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 TGFBR1P36897 503 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 RORCP51449 518 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 NUDT6P53370 316 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 OR2B6P58173 313 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 VSX2P58304 361 aaPredicted RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 SNRPGP62308 76 aaKnown RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 TSTQ16762 297 aaKnown RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 NDUFA9Q16795 377 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 PRTGQ2VWP7 1150 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 HLA-BQ31612 363 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 TCTE1Q5JU00 501 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 GARNL3Q5VVW2 1013 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 RNLSQ5VYX0 342 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 WDR74Q6RFH5 385 aaPredicted RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 TMEM64Q6YI46 380 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 ZCCHC10Q8TBK6 192 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 SAP25Q8TEE9 199 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 KLHL6Q8WZ60 621 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 MAL2Q969L2 176 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 MOAP1Q96BY2 351 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 NEURL3Q96EH8 262 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 MND1Q9BWT6 205 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 CAPN10Q9HC96 672 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 NEK6Q9HC98 313 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 SMURF1Q9HCE7 757 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 FAM60AQ9NP50 221 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 PDE7BQ9NP56 450 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 SLAMF7Q9NQ25 335 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 KCMF1Q9P0J7 381 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 FBXW2Q9UKT8 454 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 DAPP1Q9UN19 280 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 ENTPD4Q9Y227 616 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 RPL36Q9Y3U8 105 aaKnown RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 PCDHGB2Q9Y5G2 931 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 ARID1BQ8NFD5 2236 aaPredicted RBP10.83□□□□□ -0.68
RFFL-205ENST00000415395 ZDBF2Q9HCK1 2354 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 IDH3BO43837 385 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 GALR3O60755 368 aaPredicted RBP10.83□□□□□ -0.68
RFFL-205ENST00000415395 PRAMEF10O60809 474 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 CER1O95813 267 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SCG5P05408 212 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 CSNK2A2P19784 350 aaPredicted RBP10.83□□□□□ -0.68
RFFL-205ENST00000415395 CPN2P22792 545 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 PSMA1P25786 263 aaKnown RBP10.83□□□□□ -0.68
RFFL-205ENST00000415395 GTF2E2P29084 291 aaKnown RBP10.83□□□□□ -0.68
RFFL-205ENST00000415395 LIMS1P48059 325 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 MVDP53602 400 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 LIMK1P53667 647 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 CRYBA2P53672 197 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 LIM2P55344 173 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SQSTM1Q13501 440 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 NCF4Q15080 339 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 PTGES3Q15185 160 aaKnown RBP10.83□□□□□ -0.68
RFFL-205ENST00000415395 NR0B2Q15466 257 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 DEFB134Q4QY38 66 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 ARMC4Q5T2S8 1044 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SAXO2Q658L1 398 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SLC23A3Q6PIS1 610 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 CASP12Q6UXS9 341 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 KMT5CQ86Y97 462 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 ARHGEF39Q8N4T4 335 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 LINC00471Q8N535 108 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 AQP11Q8NBQ7 271 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 FAM83FQ8NEG4 500 aaPredicted RBP10.83□□□□□ -0.68
RFFL-205ENST00000415395 OR52J3Q8NH60 311 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SFXN5Q8TD22 340 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 TMEM80Q96HE8 168 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 AMDHD1Q96NU7 426 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 TGM7Q96PF1 710 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SNX18Q96RF0 628 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 BBS4Q96RK4 519 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 NIPSNAP1Q9BPW8 284 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 CENPOQ9BU64 300 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 UCK2Q9BZX2 261 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SYNDIG1Q9H7V2 258 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 CXorf36Q9H7Y0 433 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 AMBNQ9NP70 447 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SEMA3GQ9NS98 782 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SLC6A14Q9UN76 642 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SSR3Q9UNL2 185 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 ZNF451Q9Y4E5 1061 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 ZNF780BQ9Y6R6 833 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 CABIN1Q9Y6J0 2220 aa10.83□□□□□ -0.68
RFFL-205ENST00000415395 SCN3AQ9NY46 2000 aa10.82□□□□□ -0.68
RFFL-205ENST00000415395 BLACEA4D250 179 aa10.82□□□□□ -0.68
RFFL-205ENST00000415395 TOX3O15405 576 aaPredicted RBP10.82□□□□□ -0.68
RFFL-205ENST00000415395 SH3BP5O60239 455 aa10.82□□□□□ -0.68
RFFL-205ENST00000415395 OPN1SWP03999 348 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms