RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 PGGT1BP53609 377 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 TIRAPP58753 221 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 HERVK_113P63132 956 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 SLC35A2P78381 396 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 POU6F1Q14863 301 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 IFI44LQ53G44 452 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 UNC50Q53HI1 259 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 PHYHD1Q5SRE7 291 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 TMEM215Q68D42 235 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 GPR153Q6NV75 609 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 VITQ6UXI7 678 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 TMEM184AQ6ZMB5 413 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 IDO2Q6ZQW0 420 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 TRMT11Q7Z4G4 463 aaKnown RBP8.83□□□□□ -1
SNHG3-201ENST00000413987 HIPK1Q86Z02 1210 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 MFSD6LQ8IWD5 586 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 GPR137CQ8N3F9 429 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 PARP16Q8N5Y8 322 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 DTWD2Q8NBA8 298 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 UXS1Q8NBZ7 420 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 SLC38A4Q969I6 547 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 PPP1R2P1Q96PQ5 205 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 TRIB1Q96RU8 372 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 ASCL2Q99929 193 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 SLC12A9Q9BXP2 914 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 ERVK-6Q9BXR3 956 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 NUAK2Q9H093 628 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 BRD7Q9NPI1 651 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 ZNF275Q9NSD4 429 aaPredicted RBP8.83□□□□□ -1
SNHG3-201ENST00000413987 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 CCDC59Q9P031 241 aaKnown RBP8.83□□□□□ -1
SNHG3-201ENST00000413987 CA14Q9ULX7 337 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 V9GYQ6 96 aa8.83□□□□□ -1
SNHG3-201ENST00000413987 PRMT5O14744 637 aaPredicted RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 SLC30A4O14863 429 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ST8SIA3O43173 380 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 KDELR3O43731 214 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 HS6ST1O60243 411 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 LATS1O95835 1130 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 PIRTP0C851 137 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 GGT1P19440 569 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 PIGAP37287 484 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ETV6P41212 452 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 SLC6A11P48066 632 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 WNT3P56703 355 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 SOX8P57073 446 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 IL10RBQ08334 325 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 GRB7Q14451 532 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ZNF235Q14590 738 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 YIF1BQ5BJH7 314 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ZNF468Q5VIY5 522 aaPredicted RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 VN1R5Q7Z5H4 357 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 KLHDC8BQ8IXV7 354 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 MICU2Q8IYU8 434 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CPXM2Q8N436 756 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 PSD4Q8NDX1 1056 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 FAM83FQ8NEG4 500 aaPredicted RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 KBTBD8Q8NFY9 601 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 FANK1Q8TC84 345 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CYB5D2Q8WUJ1 264 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 FICDQ9BVA6 458 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 C6orf62Q9GZU0 229 aaPredicted RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 MTG2Q9H4K7 406 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ACOT13Q9NPJ3 140 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 MYLKQ15746 1914 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 WDR87Q6ZQQ6 2873 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 NUP210Q8TEM1 1887 aaPredicted RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 TRBV23OR9-2A0A075B6M9 112 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CDRT15L2A8MXV6 281 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CAPN5O15484 640 aaPredicted RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 INSIG1O15503 277 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 NDUFS6O75380 124 aaKnown RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 CYBBP04839 570 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 RORAP35398 523 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 SPAM1P38567 509 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 SLC1A2P43004 574 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 MAP2K4P45985 399 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 POLR2JP52435 117 aaKnown RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 PLK1P53350 603 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 OR4D2P58180 307 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 UFM1P61960 85 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ZP2Q05996 745 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 KEAP1Q14145 624 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 SPANXN2Q5MJ10 180 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CARD17Q5XLA6 110 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CES5AQ6NT32 575 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 PARS2Q7L3T8 475 aaKnown RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 SLC51BQ86UW2 128 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 RAB43Q86YS6 212 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 FAM109AQ8N4B1 249 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 PNPLA1Q8N8W4 532 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 OR52E4Q8NGH9 312 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ARRDC2Q8TBH0 407 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 ST6GAL2Q96JF0 529 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 MRGPRX2Q96LB1 330 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CCDC115Q96NT0 180 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 CPEB1Q9BZB8 566 aaKnown RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 AIG1Q9NVV5 245 aa8.82□□□□□ -1
SNHG3-201ENST00000413987 MRPL39Q9NYK5 338 aaKnown RBP8.82□□□□□ -1
SNHG3-201ENST00000413987 PADI2Q9Y2J8 665 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms