RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PSG6Q00889 435 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 PON3Q15166 354 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 TMEM44Q2T9K0 475 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 BEX5Q5H9J7 111 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 UBAP2Q5T6F2 1119 aaKnown RBP10.93□□□□□ -0.66
LIMS2-210ENST00000413578 SH2D5Q6ZV89 423 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 PLEKHM3Q6ZWE6 761 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 FAM214BQ7L5A3 538 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 CCDC25Q86WR0 208 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 OR4K17Q8NGC6 315 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 SELENOMQ8WWX9 145 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 KAT2AQ92830 837 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 EFHD2Q96C19 240 aaPredicted RBP10.93□□□□□ -0.66
LIMS2-210ENST00000413578 C11orf24Q96F05 449 aaPredicted RBP10.93□□□□□ -0.66
LIMS2-210ENST00000413578 ZC3HAV1LQ96H79 300 aaKnown RBP10.93□□□□□ -0.66
LIMS2-210ENST00000413578 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
LIMS2-210ENST00000413578 DSN1Q9H410 356 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 XPR1Q9UBH6 696 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 TMCO1Q9UM00 188 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 PROCRQ9UNN8 238 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 ANK2Q01484 3957 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 PSMG1O95456 288 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 OTCP00480 354 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 IL3P08700 152 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 PPP3CBP16298 524 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 HK1P19367 917 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 IL12BP29460 328 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 ALDH9A1P49189 494 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 RAE1P78406 368 aaKnown RBP10.92□□□□□ -0.66
LIMS2-210ENST00000413578 MRPS22P82650 360 aaKnown RBP10.92□□□□□ -0.66
LIMS2-210ENST00000413578 GANABQ14697 944 aaKnown RBP10.92□□□□□ -0.66
LIMS2-210ENST00000413578 GLYR1Q49A26 553 aaPredicted RBP10.92□□□□□ -0.66
LIMS2-210ENST00000413578 RAET1LQ5VY80 246 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 ANKRD34AQ69YU3 496 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 STAC2Q6ZMT1 411 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF704Q6ZNC4 412 aaPredicted RBP10.92□□□□□ -0.66
LIMS2-210ENST00000413578 CHMP1BQ7LBR1 199 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 GGNQ86UU5 652 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 SLC44A2Q8IWA5 706 aaPredicted RBP10.92□□□□□ -0.66
LIMS2-210ENST00000413578 TMEM151AQ8N4L1 468 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF611Q8N823 705 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 OR7G2Q8NG99 324 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 MRRFQ96E11 262 aaKnown RBP10.92□□□□□ -0.66
LIMS2-210ENST00000413578 HBEGFQ99075 208 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 VPS11Q9H270 941 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 ACSS3Q9H6R3 686 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 PLSCR4Q9NRQ2 329 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 FLRT3Q9NZU0 649 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 PPP4R1LQ9P1A2 415 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 VPS29Q9UBQ0 182 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 SNX6Q9UNH7 406 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 ABCG2Q9UNQ0 655 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 DSCAMO60469 2012 aa10.92□□□□□ -0.66
LIMS2-210ENST00000413578 IGLV3-32A0A0A0MS00 114 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 SEC14L5O43304 696 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 SCO2O43819 266 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 PLAUP00749 431 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 THBS1P07996 1170 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 HSD3B1P14060 373 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 NID1P14543 1247 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 CHN1P15882 459 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 IL11P20809 199 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 HSD3B2P26439 372 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 KRT20P35900 424 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 KCNJ5P48544 419 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 CDH13P55290 713 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 C2orf54Q08AI8 447 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 TNK1Q13470 666 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.91□□□□□ -0.66
LIMS2-210ENST00000413578 ERCC6LQ2NKX8 1250 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 TCHHL1Q5QJ38 904 aaPredicted RBP10.91□□□□□ -0.66
LIMS2-210ENST00000413578 SAMD14Q8IZD0 417 aaPredicted RBP10.91□□□□□ -0.66
LIMS2-210ENST00000413578 OR5M1Q8NGP8 315 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 UHMK1Q8TAS1 419 aaKnown RBP10.91□□□□□ -0.66
LIMS2-210ENST00000413578 TMEM171Q8WVE6 324 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 MTBPQ96DY7 904 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 C1GALT1C1Q96EU7 318 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 ADGRG7Q96K78 797 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 FUT8Q9BYC5 575 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 KLHL4Q9C0H6 718 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 STMN4Q9H169 189 aaPredicted RBP10.91□□□□□ -0.66
LIMS2-210ENST00000413578 NMRK1Q9NWW6 199 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 MED11Q9P086 117 aa10.91□□□□□ -0.66
LIMS2-210ENST00000413578 UTP11Q9Y3A2 253 aaKnown RBP10.91□□□□□ -0.66
LIMS2-210ENST00000413578 A0A087WV62 115 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 A8MT66 165 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 OVOL3O00110 214 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 MANBAO00462 879 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 HS3ST1O14792 307 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 SS18L1O75177 396 aaPredicted RBP10.9□□□□□ -0.66
LIMS2-210ENST00000413578 SMIM24O75264 130 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 OR4F21O95013 312 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 FCGR2AP12318 317 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 TSPAN8P19075 237 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 SLC6A8P48029 635 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 NR1H2P55055 460 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 ATP5J2P56134 94 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 CSTF3Q12996 717 aaKnown RBP10.9□□□□□ -0.66
LIMS2-210ENST00000413578 PRSS53Q2L4Q9 553 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms