RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ACTA1P68133 377 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 ATCAYQ86WG3 371 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 HDDC3Q8N4P3 179 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 ASB11Q8WXH4 323 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 C12orf57Q99622 126 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 ABCG4Q9H172 646 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 GREB1LQ9C091 1923 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 TRBV5-3A0A0A0MS03 114 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 M0QZQ0 153 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 GLYR1Q49A26 553 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 ACSM3Q53FZ2 586 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 FAM46CQ5VWP2 391 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 OR6V1Q8N148 313 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 LRRC46Q96FV0 321 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 SBF2Q86WG5 1849 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 IGLV3-10A0A075B6K4 115 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SLC9B1P1A6NJY1 282 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 NARSO43776 548 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SLC16A8O95907 504 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 IFNA6P05013 189 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 RRASP10301 218 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 GDNFP39905 211 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ARFIP1P53367 373 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 TBPL1P62380 186 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 TIAL1Q01085 375 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 IRF3Q14653 427 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 TMEM81Q6P7N7 255 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SLC24A5Q71RS6 500 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SLC9B2Q86UD5 537 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 C10orf111Q8N326 155 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 FBXW5Q969U6 566 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ZC3HAV1LQ96H79 300 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 HSPA12BQ96MM6 686 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 MIXL1Q9H2W2 232 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ABRACLQ9P1F3 81 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 PLEKHB1Q9UF11 243 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ZNF175Q9Y473 711 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 METTL21EPA6NDL7 271 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 K7ERQ8 282 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 GPR171O14626 319 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 HBQ1P09105 142 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 GTF2F2P13984 249 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SOX9P48436 509 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 MAP2K6P52564 334 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 E2F1Q01094 437 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 FGL1Q08830 312 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 FAM76BQ5HYJ3 339 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 GPR139Q6DWJ6 353 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 STX12Q86Y82 276 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SVBPQ8N300 66 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 TSEN15Q8WW01 171 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 PRELID3BQ9Y3B1 194 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ZNF705EA8MWA4 302 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 BET1O15155 118 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 GJB5O95377 273 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 SIX6O95475 246 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 TYRP14679 529 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ZNF852Q6ZMS4 543 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ZNF366Q8N895 744 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 BOLLQ8N9W6 283 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ZDHHC1Q8WTX9 485 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 PRRC1Q96M27 445 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ATF6BQ99941 703 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 GAL3ST1Q99999 423 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 AK6Q9Y3D8 172 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 TRABD2BA6NFA1 517 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 HLA-DQA2P01906 255 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 TLX1P31314 330 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 BMP8BP34820 402 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 APOOLQ6UXV4 268 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 RAB11FIP2Q7L804 512 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 OR10K1Q8NGX5 313 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 ASF1BQ9NVP2 202 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 B4GALT6Q9UBX8 382 aa13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 EXO1Q9UQ84 846 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-201ENST00000412649 MBLAC1A4D2B0 266 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 MTMR11A4FU01 709 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 GRM6O15303 877 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 TSPAN6O43657 245 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 CKBP12277 381 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 CSNK2A2P19784 350 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 ITGB7P26010 798 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 SLC9A5Q14940 896 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 Q5BKY6 102 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 CCNJQ5T5M9 372 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 FUT10Q6P4F1 479 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 NLRC3Q7RTR2 1065 aa13.1□□□□□ -0.31
CLTCL1-201ENST00000412649 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms