RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 OR5M1Q8NGP8 315 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FNDC9Q8TBE3 224 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZNF483Q8TF39 744 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MTBPQ96DY7 904 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 RNF122Q9H9V4 155 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TAS2R9Q9NYW1 312 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MCM8Q9UJA3 840 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ADAM21Q9UKJ8 722 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PROCRQ9UNN8 238 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZNF175Q9Y473 711 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CSPG4Q6UVK1 2322 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GNG14A0A1W2PPG7 69 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 H3BML4 177 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MANBAO00462 879 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CHN1P15882 459 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 EVI2BP34910 448 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PHBP35232 272 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CLDN20P56880 219 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 STX5Q13190 355 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FGFBP1Q14512 234 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PON3Q15166 354 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 EXOC3L2Q2M3D2 409 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TSNAXIP1Q2TAA8 658 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TCHHL1Q5QJ38 904 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SH2D4BQ5SQS7 431 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CXXC5Q7LFL8 322 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SAMD14Q8IZD0 417 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 OR7G2Q8NG99 324 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SPATA3Q8NHX4 192 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 UHMK1Q8TAS1 419 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PTGES2Q9H7Z7 377 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SDHAF3Q9NRP4 125 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GIMAP4Q9NUV9 329 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SENP1Q9P0U3 644 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZNF225Q9UK10 706 aa12.82□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ESYT3A0FGR9 886 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 OR2M5A3KFT3 312 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 LINC01387J3KSC0 135 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FADS1O60427 444 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PLOD3O60568 738 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 THBDP07204 575 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MPIP34949 423 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MAGEA12P43365 314 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 RPS3AP61247 264 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 RAE1P78406 368 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PSG6Q00889 435 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SGCBQ16585 318 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 UBAP2Q5T6F2 1119 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FAM214BQ7L5A3 538 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FAM9CQ8IZT9 166 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CDYL2Q8N8U2 506 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 DUSP19Q8WTR2 217 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TMEM171Q8WVE6 324 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CAVIN3Q969G5 261 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MRPL57Q9BQC6 102 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 REPIN1Q9BWE0 567 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ACSS3Q9H6R3 686 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SLC35C2Q9NQQ7 365 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 NINJ2Q9NZG7 142 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FLRT3Q9NZU0 649 aa12.81□□□□□ -0.36
HLA-DQB2-229ENST00000411527 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 A8MT66 165 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 KLF4O43474 513 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PCDH7O60245 1069 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 AQP8O94778 261 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 KRT6AP02538 564 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 KRT6BP04259 564 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 INHBAP08476 426 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 COL6A2P12110 1019 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 HSD3B1P14060 373 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 HSD3B2P26439 372 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 HSD17B3P37058 310 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 KRT6CP48668 564 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CLK3P49761 638 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SLC7A5Q01650 507 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CLCQ05315 142 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZNF155Q12901 538 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CSTF3Q12996 717 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GANABQ14697 944 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 HEPACAMQ14CZ8 416 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GUSBP1Q15486 140 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 BEX5Q5H9J7 111 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TEX35Q5T0J7 233 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PPP4R4Q6NUP7 873 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZNF704Q6ZNC4 412 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SH2D5Q6ZV89 423 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MARCH3Q86UD3 253 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 C16orf78Q8WTQ4 265 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 IGFBPL1Q8WX77 278 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 BBS4Q96RK4 519 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 C1QTNF3Q9BXJ4 246 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PRRG4Q9BZD6 226 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 STMN4Q9H169 189 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MRPL46Q9H2W6 279 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PLSCR4Q9NRQ2 329 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ABCG2Q9UNQ0 655 aa12.8□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZANQ9Y493 2812 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms