RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 RNF41Q9H4P4 317 aaPredicted RBP3.27□□□□□ -1.89
RNU2-28P-201ENST00000410457 DHX33Q9H6R0 707 aaKnown RBP3.27□□□□□ -1.89
RNU2-28P-201ENST00000410457 ADGRL4Q9HBW9 690 aa3.27□□□□□ -1.89
RNU2-28P-201ENST00000410457 RAI14Q9P0K7 980 aa3.27□□□□□ -1.89
RNU2-28P-201ENST00000410457 CYTH4Q9UIA0 394 aa3.27□□□□□ -1.89
RNU2-28P-201ENST00000410457 TDRD15B5MCY1 1934 aaKnown RBP3.27□□□□□ -1.89
RNU2-28P-201ENST00000410457 KDRP35968 1356 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 KIF16BQ96L93 1317 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CNTNAP2Q9UHC6 1331 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 SYNJ2BP-COX16A0A087WUM0 186 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CLRN2A0PK11 232 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 MBLAC1A4D2B0 266 aaPredicted RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 DUX1O43812 170 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 WNT2P09544 360 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 ANXA3P12429 323 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 RPA2P15927 270 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 ATP6V1C1P21283 382 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 GLRA2P23416 452 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CA8P35219 290 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CHI3L1P36222 383 aaPredicted RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 METAP1P53582 386 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 RPS6P62753 249 aaKnown RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CSTF1Q05048 431 aaKnown RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 PAX8Q06710 450 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 FCHO2Q0JRZ9 810 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 UBE2V2Q15819 145 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 GLIPR1L2Q4G1C9 344 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 C14orf28Q4W4Y0 310 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 LRRC23Q53EV4 343 aaPredicted RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 ZNF506Q5JVG8 444 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 DCST2Q5T1A1 773 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 OTUD3Q5T2D3 398 aaPredicted RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 SEL1L3Q68CR1 1132 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CASC1Q6TDU7 716 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 KDELC1Q6UW63 502 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 ZNF841Q6ZN19 808 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 RGS9BPQ6ZS82 235 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 LCA5Q86VQ0 697 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 Q8N377 158 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 SPEM1Q8N4L4 309 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 FAM133AQ8N9E0 248 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CSNK1G2-AS1Q8NCQ2 148 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 NANPQ8TBE9 248 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 SPRYD4Q8WW59 207 aaPredicted RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 DNAJA3Q96EY1 480 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 DHTKD1Q96HY7 919 aaPredicted RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 PSMB7Q99436 277 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 RBM4BQ9BQ04 359 aaKnown RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 ZSCAN5AQ9BUG6 496 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 NFKBIZQ9BYH8 718 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 RBM28Q9NW13 759 aaKnown RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 SENP1Q9P0U3 644 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 CHRNA9Q9UGM1 479 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 XPO7Q9UIA9 1087 aaKnown RBP3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 OR10H1Q9Y4A9 318 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 SPACA6W5XKT8 324 aa3.26□□□□□ -1.89
RNU2-28P-201ENST00000410457 A0A0J9YWU9 116 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 A0A1W2PPR1 153 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 RPL37AP8A6NKH3 93 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 K7EQM0 130 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 PPIHO43447 177 aaKnown RBP3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 BCAS1O75363 584 aaPredicted RBP3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 STX11O75558 287 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 KIAA0754O94854 1291 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 JCHAINP01591 159 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 NT5EP21589 574 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 POU3F4P49335 361 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 PPT1P50897 306 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 ARHGDIAP52565 204 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 ACTR1AP61163 376 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 ERVK11-1P61568 191 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 NUCB2P80303 420 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 CBX1P83916 185 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 CNTN2Q02246 1040 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 CHIT1Q13231 466 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 SELPLGQ14242 412 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 ATXN7L3Q14CW9 347 aaPredicted RBP3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 ZIC1Q15915 447 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 MRGPRG-AS1Q2M3A8 158 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 MS4A13Q5J8X5 152 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 RABGAP1LQ5R372 815 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 CEP85LQ5SZL2 805 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 DPY19L4Q7Z388 723 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 HSD11B1LQ7Z5J1 315 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 ABHD12Q8N2K0 398 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 SUMF1Q8NBK3 374 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 OR2T3Q8NH03 318 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 TADA1Q96BN2 335 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 RAB3CQ96E17 227 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 C9orf85Q96MD7 179 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 ZNF607Q96SK3 696 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 IWS1Q96ST2 819 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 HEXA-AS1Q9H8Q6 139 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 C6orf203Q9P0P8 240 aaPredicted RBP3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 BARX2Q9UMQ3 279 aaPredicted RBP3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 RNF24Q9Y225 148 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 GSTK1Q9Y2Q3 226 aa3.25□□□□□ -1.89
RNU2-28P-201ENST00000410457 PCNX3Q9H6A9 2034 aa3.24□□□□□ -1.89
RNU2-28P-201ENST00000410457 A0A1B0GTH9 108 aa3.24□□□□□ -1.89
RNU2-28P-201ENST00000410457 A0A1W2PNV4 684 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms