RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 GSSP48637 474 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 PCYT1AP49585 367 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CLK1P49759 484 aaKnown RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ENTPD1P49961 510 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 RGS8P57771 180 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 RACK1P63244 317 aaKnown RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SIM1P81133 766 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 MAP4K2Q12851 820 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 AQP6Q13520 282 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 FAM53BQ14153 422 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 KLHL22Q53GT1 634 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 C6orf132Q5T0Z8 1188 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 TYW3Q6IPR3 259 aaKnown RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 FAM111BQ6SJ93 734 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SLC46A3Q7Z3Q1 461 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ZER1Q7Z7L7 766 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 OR4N4Q8N0Y3 316 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CYP4Z2PQ8N1L4 340 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 C19orf47Q8N9M1 422 aaKnown RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SLC16A11Q8NCK7 471 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 TEX47Q8TBZ9 253 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 DYNC2LI1Q8TCX1 351 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 COL26A1Q96A83 441 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 DACH2Q96NX9 599 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SLC38A2Q96QD8 506 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SDF2Q99470 211 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 RAB33BQ9H082 229 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 EQTNQ9NQ60 294 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 FBXO8Q9NRD0 319 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 MRPS18AQ9NVS2 196 aaKnown RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 GPR83Q9NYM4 423 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 AASSQ9UDR5 926 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ERGIC3Q9Y282 383 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SCN3AQ9NY46 2000 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CLDN25C9JDP6 229 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 AIREO43918 545 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 UBXN7O94888 489 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 EIF2S1P05198 315 aaKnown RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 STSP08842 583 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ADORA3P0DMS8 318 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CDH3P22223 829 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 FPR3P25089 353 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 C21orf33P30042 268 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 GALNSP34059 522 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 TGFBR2P37173 567 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 MAP3K8P41279 467 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 LTB4RQ15722 352 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 PRICKLE4Q2TBC4 344 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 TCTE1Q5JU00 501 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SLC27A4Q6P1M0 643 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ZNF730Q6ZMV8 503 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ADCK1Q86TW2 530 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SLCO6A1Q86UG4 719 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 MAML2Q8IZL2 1156 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 AMER2Q8N7J2 671 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 SLC9A6Q92581 669 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CDS1Q92903 461 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CTHRC1Q96CG8 243 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 ZHX1-C8orf76Q96EF9 292 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CD180Q99467 661 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 LRRC61Q9BV99 259 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 TCEAL2Q9H3H9 227 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 PRMT8Q9NR22 394 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-205ENST00000410093 EVA1BQ9NVM1 165 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CLCA2Q9UQC9 943 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 KCNE3Q9Y6H6 103 aa12.67□□□□□ -0.38
LIMS1-205ENST00000410093 CACNA1IQ9P0X4 2223 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 A0A087WUU8 490 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 TP53P04637 393 aaPredicted RBP12.66□□□□□ -0.38
LIMS1-205ENST00000410093 LCKP06239 509 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 RNH1P13489 461 aaKnown RBP12.66□□□□□ -0.38
LIMS1-205ENST00000410093 NID1P14543 1247 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 NT5EP21589 574 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 CAPZBP47756 277 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 LSSP48449 732 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 BMXP51813 675 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 PDX1P52945 283 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 EPHA4P54764 986 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 VSX2P58304 361 aaPredicted RBP12.66□□□□□ -0.38
LIMS1-205ENST00000410093 EEF1A1P68104 462 aaKnown RBP12.66□□□□□ -0.38
LIMS1-205ENST00000410093 EFNB1P98172 346 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 C1DQ13901 141 aaKnown RBP12.66□□□□□ -0.38
LIMS1-205ENST00000410093 ZNHIT3Q15649 155 aaPredicted RBP12.66□□□□□ -0.38
LIMS1-205ENST00000410093 DUSP5Q16690 384 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 PRTGQ2VWP7 1150 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 RPL13AP3Q6NVV1 102 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 C19orf48Q6RUI8 117 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 Q6ZS52 159 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 PLEKHM3Q6ZWE6 761 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 MBOAT2Q6ZWT7 520 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 VRK2Q86Y07 508 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 MCATQ8IVS2 390 aaKnown RBP12.66□□□□□ -0.38
LIMS1-205ENST00000410093 SLC43A2Q8N370 569 aa12.66□□□□□ -0.38
LIMS1-205ENST00000410093 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms