RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SNTA1Q13424 505 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 RCAN2Q14206 197 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 SAXO2Q658L1 398 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 SLC30A6Q6NXT4 461 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 BLOC1S3Q6QNY0 202 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 BNC2Q6ZN30 1099 aaPredicted RBP20.47■□□□□ 0.87
PTCD3-203ENST00000409783 MSANTD1Q6ZTZ1 278 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 CHERPQ8IWX8 916 aaKnown RBP20.47■□□□□ 0.87
PTCD3-203ENST00000409783 MIPOL1Q8TD10 442 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 TMCO6Q96DC7 493 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 TMEM41AQ96HV5 264 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 METTL7AQ9H8H3 244 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 GALNT9Q9HCQ5 603 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 ZFP64Q9NPA5 681 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 PLSCR2Q9NRY7 297 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 SLC6A13Q9NSD5 602 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 TMEM45AQ9NWC5 275 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 FBXO34Q9NWN3 711 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 FLRT3Q9NZU0 649 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 HRH3Q9Y5N1 445 aa20.47■□□□□ 0.87
PTCD3-203ENST00000409783 TENM4Q6N022 2769 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 CCDC154A6NI56 674 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 FAM166BA8MTA8 275 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 TFECO14948 347 aaPredicted RBP20.46■□□□□ 0.87
PTCD3-203ENST00000409783 FADS1O60427 444 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 KCNH1O95259 989 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 PTPN6P29350 595 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 GAS1P54826 345 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 RPS26P62854 115 aaKnown RBP20.46■□□□□ 0.87
PTCD3-203ENST00000409783 PLGLB1Q02325 96 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 GTF3C1Q12789 2109 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 SQLEQ14534 574 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 TIGD2Q4W5G0 525 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 KRTCAP3Q53RY4 240 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 BHLHB9Q6PI77 547 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 ZAR1Q86SH2 424 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 SLC22A16Q86VW1 577 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 JADE3Q92613 823 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 CDS1Q92903 461 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 NEURL3Q96EH8 262 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 OR7D2Q96RA2 312 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 PANX1Q96RD7 426 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 BTBD2Q9BX70 525 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 OSBPL11Q9BXB4 747 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 ZNF703Q9H7S9 590 aaPredicted RBP20.46■□□□□ 0.87
PTCD3-203ENST00000409783 SEC14L3Q9UDX4 400 aa20.46■□□□□ 0.87
PTCD3-203ENST00000409783 MRTO4Q9UKD2 239 aaKnown RBP20.46■□□□□ 0.87
PTCD3-203ENST00000409783 BOKQ9UMX3 212 aaPredicted RBP20.46■□□□□ 0.87
PTCD3-203ENST00000409783 FAF1Q9UNN5 650 aaPredicted RBP20.46■□□□□ 0.87
PTCD3-203ENST00000409783 HIVEP3Q5T1R4 2406 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 DNAJC13O75165 2243 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 UNC5CO95185 931 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 GSNP06396 782 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 KRT16P08779 473 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 MATN1P21941 496 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 MAGEA5P43359 124 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 KCNK10P57789 538 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTCD3-203ENST00000409783 METTL21CQ5VZV1 264 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 COX18Q8N8Q8 333 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 OR5D16Q8NGK9 328 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 ADAMTS15Q8TE58 950 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 GTF2H4Q92759 462 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 SLC35G5Q96KT7 338 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 ZNF597Q96LX8 424 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 SLC35A5Q9BS91 424 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 CCDC167Q9P0B6 97 aa20.45■□□□□ 0.86
PTCD3-203ENST00000409783 C2orf72A6NCS6 295 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 B4DXG7 233 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 ACOT7O00154 380 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 CELA3AP09093 270 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 ZCCHC18P0CG32 403 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 HOXB9P17482 250 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-203ENST00000409783 NCF2P19878 526 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-203ENST00000409783 CAPN3P20807 821 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 ARFIP2P53365 341 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 PSMD4P55036 377 aaKnown RBP20.44■□□□□ 0.86
PTCD3-203ENST00000409783 POU6F2P78424 691 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-203ENST00000409783 SF3A3Q12874 501 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTCD3-203ENST00000409783 EIF2S3LQ2VIR3 472 aaKnown RBP20.44■□□□□ 0.86
PTCD3-203ENST00000409783 CCNJQ5T5M9 372 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 FIGNL1Q6PIW4 674 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 GFRALQ6UXV0 394 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 FGD2Q7Z6J4 655 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 GALNT10Q86SR1 603 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 PACS2Q86VP3 889 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 FAM109AQ8N4B1 249 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 WDSUB1Q8N9V3 476 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 PHF12Q96QT6 1004 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 RTN4RQ9BZR6 473 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 DEFB127Q9H1M4 99 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 UBQLN3Q9H347 655 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 KLRF1Q9NZS2 232 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 TRIM33Q9UPN9 1127 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 FLNCQ14315 2725 aa20.44■□□□□ 0.86
PTCD3-203ENST00000409783 PCNX3Q9H6A9 2034 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 RFXANKO14593 260 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 SNPHO15079 494 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 SOX30O94993 753 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 UTS2O95399 124 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms