RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 HES7Q9BYE0 225 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 HOMER3Q9NSC5 361 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 DUS2Q9NX74 493 aaKnown RBP2.71□□□□□ -1.98
PMS1-203ENST00000409593 MBD2Q9UBB5 411 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 TRMT6Q9UJA5 497 aaKnown RBP2.71□□□□□ -1.98
PMS1-203ENST00000409593 TDRKHQ9Y2W6 561 aaKnown RBP2.71□□□□□ -1.98
PMS1-203ENST00000409593 A0A0U1RRA0 63 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 PINLYPA6NC86 204 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 B4DXG7 233 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 HTATSF1O43719 755 aaKnown RBP2.7□□□□□ -1.98
PMS1-203ENST00000409593 KINO60870 393 aaKnown RBP2.7□□□□□ -1.98
PMS1-203ENST00000409593 TOXO94900 526 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 ZNF32P17041 273 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 EFNA3P52797 238 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 RPA4Q13156 261 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 DPYSQ14117 519 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 ZNF658BQ4V348 819 aaPredicted RBP2.7□□□□□ -1.98
PMS1-203ENST00000409593 AGKQ53H12 422 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 TRPM8Q7Z2W7 1104 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 TMEM185AQ8NFB2 350 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 RNF138Q8WVD3 245 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 SPATA13Q96N96 652 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 NDUFAF3Q9BU61 184 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 USP6P35125 1406 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 GRIN2DO15399 1336 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 ZMYM6O95789 1325 aa2.7□□□□□ -1.98
PMS1-203ENST00000409593 IGKV3-11P04433 115 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 NR2C1P13056 603 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 MDKP21741 143 aaPredicted RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 RBMXP38159 391 aaKnown RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 CAV2P51636 162 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 ORC2Q13416 577 aaPredicted RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 ACSF3Q4G176 576 aaPredicted RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 HACD2Q6Y1H2 254 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 WDR36Q8NI36 951 aaKnown RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 C18orf25Q96B23 403 aaPredicted RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 CCDC51Q96ER9 411 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 COQ7Q99807 217 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 SIRPDQ9H106 197 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 ZNF221Q9UK13 617 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 TEX264Q9Y6I9 313 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 GTF3C1Q12789 2109 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 ANP32DO95626 131 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 SLC35G4P0C7Q5 338 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 IL17AQ16552 155 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 CYP51A1Q16850 503 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 KHDRBS2Q5VWX1 349 aaKnown RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 FRA10AC1Q70Z53 315 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 HSD17B13Q7Z5P4 300 aaPredicted RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 CNTN4Q8IWV2 1026 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 ENTHD1Q8IYW4 607 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 VPS39Q96JC1 886 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 NOL4LQ96MY1 436 aaPredicted RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 MID1IP1Q9NPA3 183 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 PNO1Q9NRX1 252 aaKnown RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 EHFQ9NZC4 300 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 HMG20BQ9P0W2 317 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 GHRLQ9UBU3 117 aa2.69□□□□□ -1.98
PMS1-203ENST00000409593 EXOSC1Q9Y3B2 195 aaKnown RBP2.69□□□□□ -1.98
PMS1-203ENST00000409593 ARHGAP23Q9P227 1491 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 TRBV2A0A0J9YWF9 115 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 DHRS7CA6NNS2 312 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 E9PLD3 99 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 ZNF17P17021 662 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 HERVK_113P63132 956 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 ERVK-8P63133 956 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 MYBPC1Q00872 1141 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 PLOD1Q02809 727 aaPredicted RBP2.68□□□□□ -1.98
PMS1-203ENST00000409593 ZP4Q12836 540 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 UBE2V2Q15819 145 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 PKN2Q16513 984 aaKnown RBP2.68□□□□□ -1.98
PMS1-203ENST00000409593 C2orf76Q3KRA6 126 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 ADAMTSL2Q86TH1 951 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 MKXQ8IYA7 352 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 ARFGAP2Q8N6H7 521 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 SPC24Q8NBT2 197 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 BBS1Q8NFJ9 593 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 ART4Q93070 314 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 PSMG2Q969U7 264 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 CABS1Q96KC9 395 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 PLEKHF1Q96S99 279 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 ERVK-6Q9BXR3 956 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 CCSER1Q9C0I3 900 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 MYOZ2Q9NPC6 264 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 BCAP29Q9UHQ4 241 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 NEU3Q9UQ49 428 aa2.68□□□□□ -1.98
PMS1-203ENST00000409593 PPIHO43447 177 aaKnown RBP2.67□□□□□ -1.98
PMS1-203ENST00000409593 VEGFDO43915 354 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 TBL1XO60907 577 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 ASNSP08243 561 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 ZNF853P0CG23 659 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 SLC6A8P48029 635 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 KCNJ11Q14654 390 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 LASP1Q14847 261 aaKnown RBP2.67□□□□□ -1.98
PMS1-203ENST00000409593 LRIT3Q3SXY7 679 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 OR2B11Q5JQS5 317 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 ETFRF1Q6IPR1 90 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 CCDC36Q8IYA8 594 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 EXOC6Q8TAG9 804 aa2.67□□□□□ -1.98
PMS1-203ENST00000409593 ANKRD49Q8WVL7 239 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms