RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 C1QCP02747 245 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 RBBP4Q09028 425 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 DECR1Q16698 335 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 PIGGQ5H8A4 983 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 CRB2Q5IJ48 1285 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 ERICH5Q6P6B1 374 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 IGFL3Q6UXB1 125 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 NPSR1Q6W5P4 371 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 NET1Q7Z628 596 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC30A8Q8IWU4 369 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC34A3Q8N130 599 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 METTL25Q8N6Q8 603 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 SIRT6Q8N6T7 355 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 CHDHQ8NE62 594 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 CDS1Q92903 461 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 RAB8BQ92930 207 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 CDRT15Q96T59 188 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 G6PC3Q9BUM1 346 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 TRIM8Q9BZR9 551 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 ALG2Q9H553 416 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 CDCP1Q9H5V8 836 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 TMEM38AQ9H6F2 299 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 CALML5Q9NZT1 146 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 A8MVJ9 347 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 RRP9O43818 475 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 ITGA10O75578 1167 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 OR2J2O76002 312 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 NR2F1P10589 423 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 NAGAP17050 411 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 PIGAP37287 484 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 SSR4P51571 173 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 MLF1P58340 268 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 MRPS22P82650 360 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 HPCAP84074 193 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 LIPEQ05469 1076 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 PLCXD2Q0VAA5 305 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 NNATQ16517 81 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 ZNF630Q2M218 657 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 ARHGAP11BQ3KRB8 267 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 ACER2Q5QJU3 275 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 DCST2Q5T1A1 773 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 ABHD17BQ5VST6 288 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 HEPHL1Q6MZM0 1159 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 OPN5Q6U736 354 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 CALHM3Q86XJ0 350 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 DND1Q8IYX4 353 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 AMER2Q8N7J2 671 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 C11orf65Q8NCR3 313 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 TNIP2Q8NFZ5 429 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 OR2T12Q8NG77 320 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 PSMF1Q92530 271 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 TM9SF4Q92544 642 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 PIK3R3Q92569 461 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 OTUB1Q96FW1 271 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 RMND5BQ96G75 393 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 REXO5Q96IC2 774 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 ZNF583Q96ND8 569 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 TRNT1Q96Q11 434 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 LMF1Q96S06 567 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 LRMDAQ9H2I8 198 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 LIN28AQ9H9Z2 209 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 A4GALTQ9NPC4 353 aa15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 TNRC6AQ8NDV7 1962 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-208ENST00000409531 CNTRLQ7Z7A1 2325 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 FAM220BPB1ANY3 271 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 C5orf58C9J3I9 102 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 ABCB7O75027 752 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 DNAJC8O75937 253 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 KCNK2O95069 426 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 ARAFP10398 606 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 ATP6V1C1P21283 382 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 ABCD3P28288 659 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 IL12BP29460 328 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 LCN1P31025 176 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 CRISP3P54108 245 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 NCALDP61601 193 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 NADK2Q4G0N4 442 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 IGFL2Q6UWQ7 119 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 ISLR2Q6UXK2 745 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 IFNEQ86WN2 208 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 ZADH2Q8N4Q0 377 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 TMEM156Q8N614 296 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 RBMXL3Q8N7X1 1067 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 MCUR1Q96AQ8 359 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 RASL10BQ96S79 203 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 KCTD14Q9BQ13 255 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 MMADHCQ9H3L0 296 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 ZBTB20Q9HC78 741 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 POLE3Q9NRF9 147 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 STMN3Q9NZ72 180 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 NPFFR2Q9Y5X5 522 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 BSNQ9UPA5 3926 aa15.22■□□□□ 0.03
TSPAN4-208ENST00000409531 GXYLT2A0PJZ3 443 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 J3QKU1 62 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 STX11O75558 287 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 REM1O75628 298 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 BCHEP06276 602 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 GUSBP08236 651 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 HSD17B1P14061 328 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms