RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SLC3A1Q07837 685 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 IRF3Q14653 427 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 USP53Q70EK8 1073 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 TMCO6Q96DC7 493 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 GAL3ST4Q96RP7 486 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 SLC35C2Q9NQQ7 365 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 PLSCR3Q9NRY6 295 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 KLHL28Q9NXS3 571 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 CMAHPQ9Y471 501 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 SMAD9O15198 467 aaKnown RBP12.57□□□□□ -0.4
COL6A2-204ENST00000409416 LILRB3O75022 631 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 ADAP00813 363 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 HBQ1P09105 142 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 NR2F6P10588 404 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 IL7P13232 177 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 RPL4P36578 427 aaKnown RBP12.57□□□□□ -0.4
COL6A2-204ENST00000409416 SNRPNP63162 240 aaKnown RBP12.57□□□□□ -0.4
COL6A2-204ENST00000409416 DUSP2Q05923 314 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 NDUFAF6Q330K2 333 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 PDZD3Q86UT5 571 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 GLCCI1Q86VQ1 547 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 ATCAYQ86WG3 371 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 IL17RDQ8NFM7 739 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 PIGKQ92643 395 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 CDS1Q92903 461 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 HHIPL1Q96JK4 782 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 HRASLS2Q9NWW9 162 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 SH3D21A4FU49 640 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 CCDC85CA6NKD9 419 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 LRRN3E7EW58 273 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 SGK494L7N484 410 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 SOD1P00441 154 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 PCSK2P16519 638 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 PAICSP22234 425 aaKnown RBP12.57□□□□□ -0.4
COL6A2-204ENST00000409416 ACVR1BP36896 505 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 ETV5P41161 510 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 ETV1P50549 477 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL6A2-204ENST00000409416 ARL9Q6T311 187 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF793Q6ZN11 406 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 KRT74Q7RTS7 529 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 CAMKMTQ7Z624 323 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 DPH1Q9BZG8 443 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 LRRN3Q9H3W5 708 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 SEC14L4Q9UDX3 406 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 STUB1Q9UNE7 303 aa12.57□□□□□ -0.4
COL6A2-204ENST00000409416 PLXND1Q9Y4D7 1925 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 A0A1B0GVT2 93 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 HRO43593 1189 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 DOK2O60496 412 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 AIFM1O95831 613 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CSNK2A2P19784 350 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 DDCP20711 480 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF33BQ06732 778 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF155Q12901 538 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 E2F2Q14209 437 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 ACSM5Q6NUN0 579 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 PGBD2Q6P3X8 592 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 SYT9Q86SS6 491 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 TBC1D19Q8N5T2 526 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 OR8J1Q8NGP2 316 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 MCHR1Q99705 422 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 NKX3-1Q99801 234 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CTRCQ99895 268 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CDCA4Q9BXL8 241 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 UCKL1Q9NWZ5 548 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CNOT2Q9NZN8 540 aaKnown RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 P2RX2Q9UBL9 471 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 TBC1D24Q9ULP9 559 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 MGAT4BQ9UQ53 548 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 THSD7BQ9C0I4 1608 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 TCRBV21S2A2A0A5A6 115 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 NPIPB8E9PQR5 432 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 FOXE1O00358 373 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 PLOD3O60568 738 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 RAD1O60671 282 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 PDE9AO76083 593 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 SCG5P05408 212 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 PSKH1P11801 424 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 NAA10P41227 235 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 DCDC1P59894 354 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CSNK1G2P78368 415 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 SCN1BQ07699 218 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 FGL2Q14314 439 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CCDC190Q86UF4 302 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 PRR22Q8IZ63 422 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 COX18Q8N8Q8 333 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 C19orf18Q8NEA5 215 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 RPLP0P6Q8NHW5 317 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 ASB15Q8WXK1 588 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 ORAI1Q96D31 301 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 TMEM246Q9BRR3 403 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 FKBP14Q9NWM8 211 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 TP53BP1Q12888 1972 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 LOC105369274A0A096LPK9 316 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 LOC102723532A0A0G2JNH3 316 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 A0A1W2PR48 441 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 HMGN4O00479 90 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 FAAHO00519 579 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms